myRT

myRT report for GCA_902785525.1_Rumen_uncultured_genome_RUG13072

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Seq: CACZZE010000040.1 uncultured Prevotellaceae bacterium isolate RUG13072 genome assembly, contig: RUG13072_asm_40, whole genome shotgun sequence (23401 bp)
Overview 1 RT 1: 1-4185 bp Neighborhood of RT #1 [1, 4193] RVT-UG2 DUF1524 COG3586 SLC13_permease Feature: gene Location: 1-978 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 187-958 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 87-958 bp Feature: gene Location: 1299-2528 bp Feature: domain Description: DUF1524 Location: 1692-2094 bp Feature: domain Description: DUF1 524 Location: 1 692-2094 bp Feature: domain Description: COG3586 Location: 2223-2517 bp Feature: domain Description: COG3586 Location: 2223-251 7 bp Feature: gene Location: 2709-4193 bp Feature: domain Description: SLC13_permease Location: 2895-4185 bp Feature: domain Description: SLC1 3_permease Location: 2895-41 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, DUF1524 (pfam07510), COG3586 (Predicted transport protein ), SLC13_permease (cd01115)

Seq: CACZZE010000053.1 uncultured Prevotellaceae bacterium isolate RUG13072 genome assembly, contig: RUG13072_asm_53, whole genome shotgun sequence (18189 bp)
Overview 1 RT 1: 940-6843 bp Neighborhood of RT #1 [940, 6851] SusD SusD 2-Hacid_dh_4 RVT-Retrons kpsF PRK05198 Feature: gene Location: 940-2280 bp Feature: domain Description: SusD Location: 1261-1369 bp Feature: domain Description: SusD Location: 12 61-1369 bp Feature: domain Description: SusD Location: 1408-2215 bp Feature: domain Description: SusD Location: 1408-2 2 15 bp Feature: gene Location: 2402-3364 bp Feature: domain Description: 2-Hacid_dh_4 Location: 2411-3332 bp Feature: domain Description: 2 -Hacid_dh_4 Location: 2 411-3332 bp Feature: gene Location: 3625-5061 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3889-4474 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3889-4474 bp Feature: gene Location: 5132-6082 bp Feature: domain Description: kpsF Location: 5258-6059 bp Feature: domain Description: kpsF Location: 52 58-6059 bp Feature: gene Location: 6090-6851 bp Feature: domain Description: PRK05198 Location: 6099-6843 bp Feature: domain Description: PRK05198 Location: 6099-6843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SusD (NF033071), 2-Hacid_dh_4 (cd12162), RVT-Retrons, kpsF (TIGR00393), PRK05198 (2-dehydro-3-deoxyphosphooctonate aldolase; Provisional)