myRT

myRT report for GCA_902785615.1_Rumen_uncultured_genome_RUG13084

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Seq: CACZZM010000073.1 uncultured Lachnospiraceae bacterium isolate RUG13084 genome assembly, contig: RUG13084_asm_73, whole genome shotgun sequence (48170 bp)
Overview 1 RT 1: 39160-41462 bp Neighborhood of RT #1 [39160, 41462] RVT-DGRs Phage_XkdX Feature: gene Location: 39160-39435 bp Feature: gene Location: 39484-39696 bp Feature: gene Location: 39808-40926 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40021-40630 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40021 -40630 bp Feature: gene Location: 41141-41284 bp Feature: domain Description: Phage_XkdX Location: 41171-41276 bp Feature: domain Description: Phage_XkdX Location: 41 1 71 -41 276 bp Feature: gene Location: 41295-41462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: CACZZM010000082.1 uncultured Lachnospiraceae bacterium isolate RUG13084 genome assembly, contig: RUG13084_asm_82, whole genome shotgun sequence (11005 bp)
Overview 1 RT 1: 8460-10687 bp Neighborhood of RT #1 [8460, 10687] RVT-UG26 Feature: gene Location: 8460-8639 bp Feature: gene Location: 8617-8886 bp Feature: gene Location: 8921-10066 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 9074-9680 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 9074-9680 bp Feature: gene Location: 10201-10485 bp Feature: gene Location: 10448-10687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26

Seq: CACZZM010000104.1 uncultured Lachnospiraceae bacterium isolate RUG13084 genome assembly, contig: RUG13084_asm_104, whole genome shotgun sequence (10813 bp)
Overview 1 RT 1: 58-2390 bp Neighborhood of RT #1 [58, 2407] RVT_N RVT-GII LexA HTH_XRE Feature: gene Location: 58-612 bp Feature: domain Description: RVT_N Location: 205-448 bp Feature: domain Description: RVT_N Location: 205-448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493 -571 bp Feature: gene Location: 1387-2121 bp Feature: domain Description: LexA Location: 1498-2083 bp Feature: domain Description: LexA Location: 1498-2083 bp Feature: gene Location: 2213-2407 bp Feature: domain Description: HTH_XRE Location: 2228-2390 bp Feature: domain Description: HTH_XRE Location: 2228-23 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, LexA (COG1974), HTH_XRE (smart00530)

Seq: CACZZM010000131.1 uncultured Lachnospiraceae bacterium isolate RUG13084 genome assembly, contig: RUG13084_asm_131, whole genome shotgun sequence (11545 bp)
Overview 1 RT 1: 5813-11311 bp Neighborhood of RT #1 [5813, 11427] DNA_binding_1 protocat_pcaD RVT-GII GIIM COG1373 Acetyltransf_10 Feature: gene Location: 5813-6289 bp Feature: domain Description: DNA_binding_1 Location: 5963-6212 bp Feature: domain Description: DNA_binding_1 Location: 5963-6212 bp Feature: gene Location: 6409-7392 bp Feature: domain Description: protocat_pcaD Location: 6568-6940 bp Feature: domain Description: protocat_pcaD Location: 6568-694 0 bp Feature: gene Location: 7502-9121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8078-8771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8078-8771 bp Feature: domain Description: GIIM Note: maturase Location: 8831-9050 bp Feature: domain Description: GIIM Note: maturase Location: 8831-9050 bp Feature: gene Location: 9243-10574 bp Feature: domain Description: COG1373 Location: 9252-10512 bp Feature: domain Description: COG1373 Location: 9252-10512 bp Feature: gene Location: 10891-11427 bp Feature: domain Description: Acetyltransf_10 Location: 11026-11311 bp Feature: domain Description: Acetyltransf_10 Location: 11026-11311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_binding_1 (pfam01035), protocat_pcaD (TIGR02427), RVT-GII, GIIM (pfam08388), COG1373 (Predicted ATPase, AAA+ superfamily ), Acetyltransf_10 (pfam13673)