myRT

myRT report for GCA_902785795.1_Rumen_uncultured_genome_RUG13110

Download annotations/find similar RTs

Seq: CADAAD010000007.1 uncultured Bacteroidia bacterium isolate RUG13110 genome assembly, contig: RUG13110_asm_7, whole genome shotgun sequence (169199 bp)
Overview 1 RT 1: 159427-163733 bp Neighborhood of RT #1 [159427, 163864] PIN_3 RVT-UG26 LutB Feature: gene Location: 159427-159840 bp Feature: domain Description: PIN_3 Location: 159445-159772 bp Feature: domain Description: PIN_3 Location: 1 59445-1 59772 bp Feature: gene Location: 159895-160416 bp Feature: gene Location: 160591-161883 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 160873-161491 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1 60873-1 61 491 bp Feature: gene Location: 161969-162493 bp Feature: gene Location: 162542-163864 bp Feature: domain Description: LutB Location: 162584-163733 bp Feature: domain Description: LutB Location: 1 62584-1 63733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_3 (pfam13470), RVT-UG26, LutB (COG1139)

Seq: CADAAD010000021.1 uncultured Bacteroidia bacterium isolate RUG13110 genome assembly, contig: RUG13110_asm_21, whole genome shotgun sequence (54843 bp)
Overview 1 RT 1: 5597-12298 bp Neighborhood of RT #1 [5597, 12393] RVT-DGRs Phage_Mu_F LPD3 Feature: gene Location: 5597-8794 bp Feature: gene Location: 9101-9232 bp Feature: gene Location: 9235-10623 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9418-10042 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9418-10042 bp Feature: gene Location: 10629-10970 bp Feature: gene Location: 11188-12393 bp Feature: domain Description: Phage_Mu_F Location: 11527-11821 bp Feature: domain Description: Phage_Mu_F Location: 1152 7-1182 1 bp Feature: domain Description: LPD3 Location: 12079-12298 bp Feature: domain Description: LPD3 Location: 12 079-12 2 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_Mu_F (pfam04233), LPD3 (pfam18798)