myRT

myRT report for GCA_902785895.1_Rumen_uncultured_genome_RUG13120

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Seq: CADAAK010000014.1 uncultured Prevotellaceae bacterium isolate RUG13120 genome assembly, contig: RUG13120_asm_14, whole genome shotgun sequence (98302 bp)
Overview 1 RT 1: 77364-83578 bp Neighborhood of RT #1 [77364, 83578] Dockerin_I RVT-UG8 RVT-UG3 COG2865 Feature: gene Location: 77364-77504 bp Feature: gene Location: 77705-78040 bp Feature: domain Description: Dockerin_I Location: 77870-78035 bp Feature: domain Description: Dockerin_I Location: 77870-78035 bp Feature: gene Location: 78568-80484 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 79069-79513 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 79069-7951 3 bp Feature: gene Location: 80481-81671 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 80769-81234 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 80769-81 234 bp Feature: gene Location: 81699-83072 bp Feature: domain Description: COG2865 Location: 81705-83064 bp Feature: domain Description: COG2865 Location: 81 705-83064 bp Feature: gene Location: 83393-83578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dockerin_I (cd14256), RVT-UG8, RVT-UG3, COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: CADAAK010000021.1 uncultured Prevotellaceae bacterium isolate RUG13120 genome assembly, contig: RUG13120_asm_21, whole genome shotgun sequence (69087 bp)
Overview 1 RT 1: 5983-11088 bp Neighborhood of RT #1 [5983, 11432] PRK00024 OMP_RagA_SusC Serpin RVT-UG26 Succinoglycan_BP_ExoA Succinoglycan_BP_ExoA Feature: gene Location: 5983-6675 bp Feature: domain Description: PRK00024 Location: 6004-6670 bp Feature: domain Description: PRK0002 4 Location: 6004-6670 bp Feature: gene Location: 6697-8130 bp Feature: domain Description: OMP_RagA_SusC Location: 6766-6976 bp Feature: domain Description: OMP_RagA_SusC Location: 6766-6976 bp Feature: domain Description: Serpin Location: 7057-8122 bp Feature: domain Description: Serpin Location: 7057-812 2 bp Feature: gene Location: 8312-9622 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 8612-9230 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 8612 -92 30 bp Feature: gene Location: 9677-10177 bp Feature: gene Location: 10239-11432 bp Feature: domain Description: Succinoglycan_BP_ExoA Location: 10248-10551 bp Feature: domain Description: Succinoglycan_BP_ExoA Location: 102 48-10551 bp Feature: domain Description: Succinoglycan_BP_ExoA Location: 10713-11088 bp Feature: domain Description: Succinoglycan_BP_ExoA Location: 10713-11088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), OMP_RagA_SusC (TIGR04056), Serpin (pfam00079), RVT-UG26, Succinoglycan_BP_ExoA (cd02525)