myRT

myRT report for GCA_902786055.1_Rumen_uncultured_genome_RUG13133

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Seq: CADABD010000027.1 uncultured Erysipelotrichaceae bacterium isolate RUG13133 genome assembly, contig: RUG13133_asm_27, whole genome shotgun sequence (24049 bp)
Overview 1 RT 1: 737-6219 bp Neighborhood of RT #1 [737, 6219] AAA15 AbiEi_4 RVT-GII GIIM Feature: gene Location: 737-2005 bp Feature: domain Description: AAA15 Location: 740-1973 bp Feature: domain Description: AAA1 5 Location: 740-1 973 bp Feature: gene Location: 2444-3070 bp Feature: domain Description: AbiEi_4 Location: 2519-2630 bp Feature: domain Description: AbiEi_4 Location: 251 9-2630 bp Feature: gene Location: 3327-4619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3540-4155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3540-41 55 bp Feature: domain Description: GIIM Note: maturase Location: 4215-4446 bp Feature: domain Description: GIIM Note: maturase Location: 421 5-4446 bp Feature: gene Location: 5274-5834 bp Feature: gene Location: 5857-6219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEi_4 (pfam13338), RVT-GII, GIIM (pfam08388), AAA15 (COG1106)

Seq: CADABD010000053.1 uncultured Erysipelotrichaceae bacterium isolate RUG13133 genome assembly, contig: RUG13133_asm_53, whole genome shotgun sequence (8357 bp)
Overview 1 RT 1: 458-4694 bp Neighborhood of RT #1 [458, 4705] MutS_I Avd_like RVT-DGRs PRK06222 PRK12831 Feature: gene Location: 458-1021 bp Feature: domain Description: MutS_I Location: 626-800 bp Feature: domain Description: MutS_I Location: 62 6-800 bp Feature: gene Location: 1008-1364 bp Feature: domain Description: Avd_like Location: 1041-1350 bp Feature: domain Description: Avd_like Location: 1041-1350 bp Feature: gene Location: 1351-2457 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1519-2251 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1519-2 2 51 bp Feature: gene Location: 2512-3351 bp Feature: domain Description: PRK06222 Location: 2515-3331 bp Feature: domain Description: PRK062 2 2 Location: 2 515-3331 bp Feature: gene Location: 3344-4705 bp Feature: domain Description: PRK12831 Location: 3350-4694 bp Feature: domain Description: PRK12 831 Location: 3350-4694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, PRK06222 (sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein), PRK12831 (putative oxidoreductase; Provisional), MutS_I (pfam01624)

Seq: CADABD010000093.1 uncultured Erysipelotrichaceae bacterium isolate RUG13133 genome assembly, contig: RUG13133_asm_93, whole genome shotgun sequence (3901 bp)
Overview 1 RT 1: 2-1581 bp Neighborhood of RT #1 [2, 1592] RVT-DGRs Avd_like Feature: gene Location: 2-319 bp Feature: gene Location: 333-860 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 342-639 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 42-63 9 bp Feature: gene Location: 946-1248 bp Feature: gene Location: 1233-1592 bp Feature: domain Description: Avd_like Location: 1266-1581 bp Feature: domain Description: Avd_like Location: 1266-1581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs