myRT

myRT report for GCA_902786205.1_Rumen_uncultured_genome_RUG13148

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Seq: CADABQ010000008.1 uncultured Lachnospiraceae bacterium isolate RUG13148 genome assembly, contig: RUG13148_asm_8, whole genome shotgun sequence (140321 bp)
Overview 1 RT 1: 71066-76527 bp Neighborhood of RT #1 [71066, 76527] FlgL RVT-GII RVT-GII GIIM COG2604 Feature: gene Location: 71066-72325 bp Feature: domain Description: FlgL Location: 71075-72323 bp Feature: domain Description: FlgL Location: 71 075-72323 bp Feature: gene Location: 72598-72750 bp Feature: gene Location: 72822-73274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73158-73257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 58-73257 bp Feature: gene Location: 73360-74091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73363-73783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73363-73783 bp Feature: domain Description: GIIM Note: maturase Location: 73837-74065 bp Feature: domain Description: GIIM Note: maturase Location: 73837-74065 bp Feature: gene Location: 74402-76285 bp Feature: domain Description: COG2604 Location: 74405-76097 bp Feature: domain Description: COG2604 Location: 74405-76097 bp Feature: gene Location: 76288-76527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlgL (COG1344), RVT-GII, GIIM (pfam08388), COG2604 (Uncharacterized conserved protein )

Seq: CADABQ010000038.1 uncultured Lachnospiraceae bacterium isolate RUG13148 genome assembly, contig: RUG13148_asm_38, whole genome shotgun sequence (23919 bp)
Overview 1 RT 1: 10182-16851 bp Neighborhood of RT #1 [10182, 16883] COG0610 RVT-UG19 RMtype1_S_LdeBORF1052P-TRD2-CR2 Feature: gene Location: 10182-10340 bp Feature: gene Location: 10676-13891 bp Feature: domain Description: COG0610 Location: 10691-13709 bp Feature: domain Description: COG0610 Location: 10691-13709 bp Feature: gene Location: 13964-16081 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 14360-14837 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 14360-14837 bp Feature: gene Location: 16097-16273 bp Feature: gene Location: 16317-16883 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 16344-16851 bp Feature: domain Description: RMtype1_S_LdeBORF1052 P-TRD2 -CR2 Location: 16344-16851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG19, RMtype1_S_LdeBORF1052P-TRD2-CR2 (cd17278)