myRT

myRT report for GCA_902786215.1_Rumen_uncultured_genome_RUG13149

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Seq: CADABR010000019.1 uncultured Lachnospiraceae bacterium isolate RUG13149 genome assembly, contig: RUG13149_asm_19, whole genome shotgun sequence (51016 bp)
Overview 1 RT 1: 40861-44339 bp Neighborhood of RT #1 [40861, 44339] Acetyltransf_9 RVT-GII Feature: gene Location: 40861-41328 bp Feature: domain Description: Acetyltransf_9 Location: 40909-41269 bp Feature: domain Description: Acetyltransf_9 Location: 40909-41 269 bp Feature: gene Location: 41606-41845 bp Feature: gene Location: 42144-42281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42147-42255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 47-42255 bp Feature: gene Location: 42671-43234 bp Feature: gene Location: 43239-44339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_9 (pfam13527), RVT-GII

Seq: CADABR010000034.1 uncultured Lachnospiraceae bacterium isolate RUG13149 genome assembly, contig: RUG13149_asm_34, whole genome shotgun sequence (78498 bp)
Overview 1 RT 1: 55101-59624 bp Neighborhood of RT #1 [55101, 59641] Precorrin_2_C20_MT RVT-UG26 RT_G2_intron DUF3878 NrnA NrnB NrnA Feature: gene Location: 55101-55778 bp Feature: domain Description: Precorrin_2_C20_MT Location: 55116-55776 bp Feature: domain Description: Precorrin_2 _C2 0_MT Location: 55116-55776 bp Feature: gene Location: 56181-56411 bp Feature: gene Location: 56461-57633 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 56662-56914 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 56662 -56914 bp Feature: domain Description: RT_G2_intron Location: 56917-57172 bp Feature: domain Description: RT_G2 _intron Location: 56917-57172 bp Feature: gene Location: 57584-58549 bp Feature: domain Description: DUF3878 Location: 57599-58439 bp Feature: domain Description: DUF3878 Location: 57599-58439 bp Feature: gene Location: 58658-59641 bp Feature: domain Description: NrnA Location: 58721-58874 bp Feature: domain Description: NrnA Location: 5872 1-58874 bp Feature: domain Description: NrnB Location: 58901-59057 bp Feature: domain Description: NrnB Location: 58901-59057 bp Feature: domain Description: NrnA Location: 59417-59624 bp Feature: domain Description: NrnA Location: 59417-5962 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Precorrin_2_C20_MT (cd11645), RVT-UG26, RT_G2_intron (cd01651), DUF3878 (pfam12994), NrnA (COG0618), NrnB (COG2404)

Seq: CADABR010000053.1 uncultured Lachnospiraceae bacterium isolate RUG13149 genome assembly, contig: RUG13149_asm_53, whole genome shotgun sequence (18288 bp)
Overview 1 RT 1: 13294-18028 bp Neighborhood of RT #1 [13294, 18234] DUF4313 PrgI VirB4 RVT-GII KOG4768 TraC-F-type Feature: gene Location: 13294-13737 bp Feature: domain Description: DUF4313 Location: 13393-13693 bp Feature: domain Description: DUF43 13 Location: 13 3 93 -13 693 bp Feature: gene Location: 13743-14693 bp Feature: domain Description: PrgI Location: 13758-14025 bp Feature: domain Description: PrgI Location: 13 758-14025 bp Feature: domain Description: VirB4 Location: 14109-14634 bp Feature: domain Description: VirB4 Location: 14109-1463 4 bp Feature: gene Location: 15374-17197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15674-16373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15674-163 73 bp Feature: domain Description: KOG4768 Location: 16508-16613 bp Feature: domain Description: KOG4768 Location: 16508-16613 bp Feature: gene Location: 17335-18234 bp Feature: domain Description: TraC-F-type Location: 17470-18028 bp Feature: domain Description: TraC-F-type Location: 17470-18028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4313 (pfam14190), PrgI (pfam12666), VirB4 (COG3451), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), TraC-F-type (TIGR02746)