myRT

myRT report for GCA_902786305.1_Rumen_uncultured_genome_RUG13161

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Seq: CADACF010000009.1 uncultured Prevotellaceae bacterium isolate RUG13161 genome assembly, contig: RUG13161_asm_9, whole genome shotgun sequence (257156 bp)
Overview 1 RT 1: 119386-124591 bp Neighborhood of RT #1 [119386, 124980] NigD_N NigD_C LPLAT_DHAPAT-like RVT-GII COG1373 Bacuni_01323_like Feature: gene Location: 119386-120045 bp Feature: domain Description: NigD_N Location: 119506-119656 bp Feature: domain Description: NigD_N Location: 1 1 9506-1 1 9656 bp Feature: domain Description: NigD_C Location: 119719-120037 bp Feature: domain Description: NigD_C Location: 1 1 971 9-1 20037 bp Feature: gene Location: 120087-121217 bp Feature: domain Description: LPLAT_DHAPAT-like Location: 120366-120768 bp Feature: domain Description: LPLAT_DHAPAT-like Location: 1 20366-1 20768 bp Feature: gene Location: 121285-121560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121288-121507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 288-1 21 507 bp Feature: gene Location: 122398-123537 bp Feature: domain Description: COG1373 Location: 122407-123508 bp Feature: domain Description: COG1 373 Location: 1 22407-1 23508 bp Feature: gene Location: 123868-124980 bp Feature: domain Description: Bacuni_01323_like Location: 124015-124591 bp Feature: domain Description: Bacuni_01 323_like Location: 1 2401 5-1 24591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NigD_N (pfam12667), NigD_C (pfam17415), LPLAT_DHAPAT-like (cd07993), RVT-GII, COG1373 (Predicted ATPase, AAA+ superfamily ), Bacuni_01323_like (cl25912)

Seq: CADACF010000010.1 uncultured Prevotellaceae bacterium isolate RUG13161 genome assembly, contig: RUG13161_asm_10, whole genome shotgun sequence (95000 bp)
Overview 1 RT 1: 2560-9109 bp Neighborhood of RT #1 [2560, 10662] HflX HflX RVT-UG26 LacZ LacZ Feature: gene Location: 2560-3879 bp Feature: domain Description: HflX Location: 2596-2800 bp Feature: domain Description: HflX Location: 2 596-2 800 bp Feature: domain Description: HflX Location: 2869-3829 bp Feature: domain Description: HflX Location: 2 869-382 9 bp Feature: gene Location: 4155-5222 bp Feature: gene Location: 5673-6911 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 5874-6492 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 5874-6492 bp Feature: gene Location: 7077-7592 bp Feature: gene Location: 7699-10662 bp Feature: domain Description: LacZ Location: 8026-8218 bp Feature: domain Description: LacZ Location: 802 6-82 18 bp Feature: domain Description: LacZ Location: 8605-9109 bp Feature: domain Description: LacZ Location: 8605-9109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HflX (COG2262), RVT-UG26, LacZ (COG3250)