myRT

myRT report for GCA_902786365.1_Rumen_uncultured_genome_RUG13154

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Seq: CADACD010000022.1 uncultured Lachnospiraceae bacterium isolate RUG13154 genome assembly, contig: RUG13154_asm_22, whole genome shotgun sequence (44759 bp)
Overview 1 RT 1: 36068-40700 bp Neighborhood of RT #1 [36068, 40834] RVT-AbiP2 RloB AAA15 Feature: gene Location: 36068-36286 bp Feature: gene Location: 36577-37377 bp Feature: gene Location: 37382-38905 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 37811-38267 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3781 1 -38267 bp Feature: gene Location: 38941-39552 bp Feature: domain Description: RloB Location: 38968-39535 bp Feature: domain Description: RloB Location: 38968-39535 bp Feature: gene Location: 39554-40834 bp Feature: domain Description: AAA15 Location: 39557-40700 bp Feature: domain Description: AAA1 5 Location: 39557-40700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, RloB (pfam13707), AAA15 (COG1106)

Seq: CADACD010000041.1 uncultured Lachnospiraceae bacterium isolate RUG13154 genome assembly, contig: RUG13154_asm_41, whole genome shotgun sequence (22590 bp)
Overview 1 RT 1: 4471-8322 bp Neighborhood of RT #1 [4471, 8322] Mob_Pre SH3_and_anchor RVT-GII Feature: gene Location: 4471-5745 bp Feature: domain Description: Mob_Pre Location: 4543-5128 bp Feature: domain Description: Mob_Pre Location: 4543-512 8 bp Feature: domain Description: SH3_and_anchor Location: 5341-5680 bp Feature: domain Description: SH3_and_anchor Location: 5341-5680 bp Feature: gene Location: 5721-6542 bp Feature: gene Location: 6514-7173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6520-7096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 652 0-7096 bp Feature: gene Location: 7376-7834 bp Feature: gene Location: 7831-8322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mob_Pre (pfam01076), SH3_and_anchor (TIGR04211), RVT-GII

Seq: CADACD010000043.1 uncultured Lachnospiraceae bacterium isolate RUG13154 genome assembly, contig: RUG13154_asm_43, whole genome shotgun sequence (29645 bp)
Overview 1 RT 1: 13811-17352 bp Neighborhood of RT #1 [13811, 17352] AAA_22 AAA_22 RVT-UG2 Feature: gene Location: 13811-14212 bp Feature: domain Description: AAA_22 Location: 13874-13952 bp Feature: domain Description: AAA_22 Location: 13 874-13 952 bp Feature: domain Description: AAA_22 Location: 14000-14105 bp Feature: domain Description: AAA_22 Location: 14000-14105 bp Feature: gene Location: 14214-14885 bp Feature: gene Location: 15111-15890 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 15291-15585 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 15291-15585 bp Feature: gene Location: 15880-16998 bp Feature: gene Location: 17149-17352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_22 (pfam13401), RVT-UG2

Seq: CADACD010000076.1 uncultured Lachnospiraceae bacterium isolate RUG13154 genome assembly, contig: RUG13154_asm_76, whole genome shotgun sequence (5439 bp)
Overview 1 RT 1: 1-2914 bp Neighborhood of RT #1 [1, 2914] RVT-GII Intron_maturas2 Feature: gene Location: 1-147 bp Feature: gene Location: 184-1977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-1270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 51-1270 bp Feature: domain Description: Intron_maturas2 Location: 1360-1654 bp Feature: domain Description: Intron_maturas2 Location: 1360-1654 bp Feature: gene Location: 2124-2384 bp Feature: gene Location: 2492-2914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)