myRT

myRT report for GCA_902788215.1_Rumen_uncultured_genome_RUG13348

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Seq: CADAJL010000006.1 uncultured Lachnospiraceae bacterium isolate RUG13348 genome assembly, contig: RUG13348_asm_6, whole genome shotgun sequence (52876 bp)
Overview 1 RT 1: 12385-17162 bp Neighborhood of RT #1 [12385, 17162] SBP_bac_1 COG1373 RVT-GII GIIM Feature: gene Location: 12385-13113 bp Feature: domain Description: SBP_bac_1 Location: 12751-13093 bp Feature: domain Description: SBP_bac_1 Location: 1 2751 -1 3093 bp Feature: gene Location: 13213-14535 bp Feature: domain Description: COG1373 Location: 13240-14515 bp Feature: domain Description: COG1 373 Location: 1 3240-1 451 5 bp Feature: gene Location: 14686-16083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15007-15631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5007-1 5631 bp Feature: domain Description: GIIM Note: maturase Location: 15685-15904 bp Feature: domain Description: GIIM Note: maturase Location: 1 5685-1 5904 bp Feature: gene Location: 16201-16692 bp Feature: gene Location: 17022-17162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SBP_bac_1 (pfam01547), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-GII, GIIM (pfam08388)

Seq: CADAJL010000012.1 uncultured Lachnospiraceae bacterium isolate RUG13348 genome assembly, contig: RUG13348_asm_12, whole genome shotgun sequence (54379 bp)
Overview 1 RT 1: 36077-39443 bp Neighborhood of RT #1 [36077, 39443] RVT-DGRs Phage_XkdX Feature: gene Location: 36077-37363 bp Feature: gene Location: 37445-37582 bp Feature: gene Location: 37741-38904 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38002-38605 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38002 -38605 bp Feature: gene Location: 39127-39282 bp Feature: domain Description: Phage_XkdX Location: 39133-39253 bp Feature: domain Description: Phage_XkdX Location: 39133-392 53 bp Feature: gene Location: 39279-39443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: CADAJL010000026.1 uncultured Lachnospiraceae bacterium isolate RUG13348 genome assembly, contig: RUG13348_asm_26, whole genome shotgun sequence (26067 bp)
Overview 1 RT 1: 20178-24385 bp Neighborhood of RT #1 [20178, 24387] RVT-GII GIIM CitM Feature: gene Location: 20178-20522 bp Feature: gene Location: 20822-20977 bp Feature: gene Location: 21063-22346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21273-21888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21273 -21888 bp Feature: domain Description: GIIM Note: maturase Location: 21948-22179 bp Feature: domain Description: GIIM Note: maturase Location: 21948-22179 bp Feature: gene Location: 22723-22881 bp Feature: gene Location: 22981-24387 bp Feature: domain Description: CitM Location: 23002-24385 bp Feature: domain Description: CitM Location: 23 002-243 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CitM (COG2851)