myRT

myRT report for GCA_902789355.1_Rumen_uncultured_genome_RUG13455

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Seq: CADANM010000017.1 uncultured Bacteroidia bacterium isolate RUG13455 genome assembly, contig: RUG13455_asm_17, whole genome shotgun sequence (76355 bp)
Overview 1 RT 1: 42074-48240 bp Neighborhood of RT #1 [42074, 48251] DMT_6 RVT-UG26 HAD_PPase RhaT COG3537 Feature: gene Location: 42074-42442 bp Feature: domain Description: DMT_6 Location: 42092-42434 bp Feature: domain Description: DMT_6 Location: 42092-42434 bp Feature: gene Location: 42498-43040 bp Feature: gene Location: 43193-44395 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 43394-44009 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 43394-44009 bp Feature: gene Location: 44429-45076 bp Feature: domain Description: HAD_PPase Location: 44435-45059 bp Feature: domain Description: HAD_PPase Location: 44435-45059 bp Feature: gene Location: 45063-48251 bp Feature: domain Description: RhaT Location: 45090-45951 bp Feature: domain Description: RhaT Location: 45090-45951 bp Feature: domain Description: COG3537 Location: 46011-48240 bp Feature: domain Description: COG3537 Location: 4601 1 -48240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DMT_6 (pfam04342), RVT-UG26, HAD_PPase (cd07509), RhaT (TIGR00776), COG3537 (Putative alpha-1,2-mannosidase )

Seq: CADANM010000041.1 uncultured Bacteroidia bacterium isolate RUG13455 genome assembly, contig: RUG13455_asm_41, whole genome shotgun sequence (3013 bp)
Overview 1 RT 1: 1-3004 bp Neighborhood of RT #1 [1, 3012] COG2509 RVT-GII GIIM PRK06853 Feature: gene Location: 1-357 bp Feature: domain Description: COG2509 Location: 4-349 bp Feature: domain Description: COG2 509 Location: 4-349 bp Feature: gene Location: 508-1905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-1453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 9-1453 bp Feature: domain Description: GIIM Note: maturase Location: 1507-1723 bp Feature: domain Description: GIIM Note: maturase Location: 1507-172 3 bp Feature: gene Location: 2107-2397 bp Feature: gene Location: 2404-3012 bp Feature: domain Description: PRK06853 Location: 2449-3004 bp Feature: domain Description: PRK06853 Location: 2 449-3004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2509 (FAD-dependent dehydrogenase ), RVT-GII, GIIM (pfam08388), PRK06853 (indolepyruvate oxidoreductase subunit beta; Reviewed)