myRT

myRT report for GCA_902789365.1_Rumen_uncultured_genome_RUG13460

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Seq: CADANQ010000003.1 uncultured Clostridiales bacterium isolate RUG13460 genome assembly, contig: RUG13460_asm_3, whole genome shotgun sequence (83773 bp)
Overview 1 RT 1: 2-1546 bp Neighborhood of RT #1 [2, 1548] RVT-GII GIIM RpoE Feature: gene Location: 2-604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-1 1 6 bp Feature: domain Description: GIIM Note: maturase Location: 176-404 bp Feature: domain Description: GIIM Note: maturase Location: 1 76-404 bp Feature: gene Location: 842-1027 bp Feature: gene Location: 1066-1548 bp Feature: domain Description: RpoE Location: 1081-1546 bp Feature: domain Description: RpoE Location: 1 081 -1 546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), RVT-GII, GIIM (pfam08388)

Seq: CADANQ010000032.1 uncultured Clostridiales bacterium isolate RUG13460 genome assembly, contig: RUG13460_asm_32, whole genome shotgun sequence (30087 bp)
Overview 1 RT 1: 25177-29889 bp Neighborhood of RT #1 [25177, 30086] Met_gamma_lyase Cym1 RVT-GII GIIM Feature: gene Location: 25177-26436 bp Feature: domain Description: Met_gamma_lyase Location: 25207-26413 bp Feature: domain Description: Met_gamma_lyase Location: 2 52 07-2 6413 bp Feature: gene Location: 26457-29336 bp Feature: domain Description: Cym1 Location: 26478-29277 bp Feature: domain Description: Cym1 Location: 2 6478-2 92 77 bp Feature: gene Location: 29487-30086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29493-29601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9493-2 9601 bp Feature: domain Description: GIIM Note: maturase Location: 29661-29889 bp Feature: domain Description: GIIM Note: maturase Location: 2 9661-2 9889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Met_gamma_lyase (pfam06838), Cym1 (COG1026), RVT-GII, GIIM (pfam08388)