myRT

myRT report for GCA_902789535.1_Rumen_uncultured_genome_RUG13479

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Seq: CADAOH010000005.1 uncultured Prevotellaceae bacterium isolate RUG13479 genome assembly, contig: RUG13479_asm_5, whole genome shotgun sequence (185863 bp)
Overview 1 RT 1: 144033-150372 bp Neighborhood of RT #1 [144033, 150509] HelD UvrD UvrD RVT-AbiP2 DUF1848 HicB Feature: gene Location: 144033-145388 bp Feature: domain Description: HelD Location: 144078-144165 bp Feature: domain Description: HelD Location: 1 44078-1 441 65 bp Feature: domain Description: UvrD Location: 144552-145101 bp Feature: domain Description: UvrD Location: 1 44552-1 451 01 bp Feature: domain Description: UvrD Location: 145203-145368 bp Feature: domain Description: UvrD Location: 1 45203-1 45368 bp Feature: gene Location: 145395-147125 bp Feature: gene Location: 147364-149073 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 147823-148297 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 47823-1 48297 bp Feature: gene Location: 149105-150199 bp Feature: domain Description: DUF1848 Location: 149213-150128 bp Feature: domain Description: DUF1 848 Location: 1 4921 3-1 501 28 bp Feature: gene Location: 150249-150509 bp Feature: domain Description: HicB Location: 150273-150372 bp Feature: domain Description: HicB Location: 1 50273-1 50372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HelD (COG3973), UvrD (COG0210), RVT-AbiP2, DUF1848 (pfam08902), HicB (pfam05534)

Seq: CADAOH010000013.1 uncultured Prevotellaceae bacterium isolate RUG13479 genome assembly, contig: RUG13479_asm_13, whole genome shotgun sequence (235181 bp)
Overview 1 RT 1: 110948-115711 bp Neighborhood of RT #1 [110948, 117180] RVT-AbiP2 SLR SLR Feature: gene Location: 110948-111109 bp Feature: gene Location: 111636-111935 bp Feature: gene Location: 112142-113827 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 112580-113063 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 112 580-113063 bp Feature: gene Location: 113841-114101 bp Feature: gene Location: 114094-117180 bp Feature: domain Description: SLR Location: 114973-115342 bp Feature: domain Description: SLR Location: 114973-115342 bp Feature: domain Description: SLR Location: 115483-115711 bp Feature: domain Description: SLR Location: 115483-115711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, SLR (sd00010)

Seq: CADAOH010000014.1 uncultured Prevotellaceae bacterium isolate RUG13479 genome assembly, contig: RUG13479_asm_14, whole genome shotgun sequence (62809 bp)
Overview 1 RT 1: 55154-61438 bp Neighborhood of RT #1 [55154, 61438] PRK05198 kpsF RVT-Retrons 2-Hacid_dh_4 Feature: gene Location: 55154-55915 bp Feature: domain Description: PRK05198 Location: 55163-55907 bp Feature: domain Description: PRK05198 Location: 55163 -55907 bp Feature: gene Location: 55923-56873 bp Feature: domain Description: kpsF Location: 56049-56850 bp Feature: domain Description: kpsF Location: 56049-56850 bp Feature: gene Location: 56933-58417 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57245-57827 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57245-57827 bp Feature: gene Location: 58690-59652 bp Feature: domain Description: 2-Hacid_dh_4 Location: 58699-59620 bp Feature: domain Description: 2-Hacid_dh_4 Location: 58699-59620 bp Feature: gene Location: 59804-61438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05198 (2-dehydro-3-deoxyphosphooctonate aldolase; Provisional), kpsF (TIGR00393), RVT-Retrons, 2-Hacid_dh_4 (cd12162)