myRT

myRT report for GCA_902789655.1_Rumen_uncultured_genome_RUG13493

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Seq: CADAPD010000026.1 uncultured Clostridiales bacterium isolate RUG13493 genome assembly, contig: RUG13493_asm_26, whole genome shotgun sequence (66591 bp)
Overview 1 RT 1: 49722-53622 bp Neighborhood of RT #1 [49722, 53699] RVT-GII GIIM DUF3343 Feature: gene Location: 49722-49949 bp Feature: gene Location: 50616-51476 bp Feature: gene Location: 51581-52843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51785-52400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 785-52400 bp Feature: domain Description: GIIM Note: maturase Location: 52460-52694 bp Feature: domain Description: GIIM Note: maturase Location: 52460-52694 bp Feature: gene Location: 52969-53133 bp Feature: gene Location: 53421-53699 bp Feature: domain Description: DUF3343 Location: 53433-53622 bp Feature: domain Description: DUF3343 Location: 53433-53622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3343 (pfam11823)

Seq: CADAPD010000096.1 uncultured Clostridiales bacterium isolate RUG13493 genome assembly, contig: RUG13493_asm_96, whole genome shotgun sequence (3481 bp)
Overview 1 RT 1: 758-3289 bp Neighborhood of RT #1 [758, 3289] PRK00967 SoxR RVT-GII Intron_maturas2 INT_ICEBs1_C_like Feature: gene Location: 758-1078 bp Feature: domain Description: PRK00967 Location: 776-1064 bp Feature: domain Description: PRK00967 Location: 776-1064 bp Feature: gene Location: 1059-1700 bp Feature: domain Description: SoxR Location: 1062-1341 bp Feature: domain Description: SoxR Location: 1062 -1341 bp Feature: gene Location: 1964-3019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1988-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1988-2 180 bp Feature: domain Description: Intron_maturas2 Location: 2270-2546 bp Feature: domain Description: Intron_maturas2 Location: 2 2 70-2 546 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2546-2954 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2 546-2 954 bp Feature: gene Location: 2723-3289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00967 (hypothetical protein; Provisional), SoxR (TIGR01950), RVT-GII, Intron_maturas2 (pfam01348), INT_ICEBs1_C_like (cd01189)