myRT

myRT report for GCA_902790165.1_Rumen_uncultured_genome_RUG13548

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Seq: CADARD010000002.1 uncultured Clostridiales bacterium isolate RUG13548 genome assembly, contig: RUG13548_asm_2, whole genome shotgun sequence (88812 bp)
Overview 1 RT 1: 17053-22441 bp Neighborhood of RT #1 [17053, 22461] SpoU SpoU-like_rRNA-MTase RVT-UG26 NHLM_micro_ABC2 Feature: gene Location: 17053-17778 bp Feature: domain Description: SpoU Location: 17125-17773 bp Feature: domain Description: SpoU Location: 1 71 25-1 7773 bp Feature: gene Location: 17781-18515 bp Feature: domain Description: SpoU-like_rRNA-MTase Location: 18081-18384 bp Feature: domain Description: SpoU-like_rRNA-MTase Location: 1 8081 -1 8384 bp Feature: gene Location: 18802-20034 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 19003-19618 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1 9003-1 961 8 bp Feature: gene Location: 20056-20265 bp Feature: gene Location: 20389-22461 bp Feature: domain Description: NHLM_micro_ABC2 Location: 20467-22441 bp Feature: domain Description: NHLM_micro_ABC2 Location: 20467-22441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoU (COG0566), SpoU-like_rRNA-MTase (cd18095), RVT-UG26, NHLM_micro_ABC2 (TIGR03797)

Seq: CADARD010000018.1 uncultured Clostridiales bacterium isolate RUG13548 genome assembly, contig: RUG13548_asm_18, whole genome shotgun sequence (182323 bp)
Overview 1 RT 1: 156909-161847 bp Neighborhood of RT #1 [156909, 161945] AAA_18 prsA prsA RVT-GII GIIM DUF5131 Feature: gene Location: 156909-157394 bp Feature: domain Description: AAA_18 Location: 156921-157263 bp Feature: domain Description: AAA_18 Location: 15692 1-1572 63 bp Feature: gene Location: 157605-159113 bp Feature: domain Description: prsA Location: 157710-158232 bp Feature: domain Description: prsA Location: 157710-1582 32 bp Feature: domain Description: prsA Location: 158475-158910 bp Feature: domain Description: prsA Location: 158475-158910 bp Feature: gene Location: 159214-160641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159538-160162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159538-160162 bp Feature: domain Description: GIIM Note: maturase Location: 160216-160450 bp Feature: domain Description: GIIM Note: maturase Location: 1602 16-160450 bp Feature: gene Location: 160990-161127 bp Feature: gene Location: 161184-161945 bp Feature: domain Description: DUF5131 Location: 161205-161847 bp Feature: domain Description: DUF5131 Location: 1612 05-161847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_18 (pfam13238), prsA (PRK04405), RVT-GII, GIIM (pfam08388), DUF5131 (pfam07505)