myRT

myRT report for GCA_902790195.1_Rumen_uncultured_genome_RUG13545

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Seq: CADARB010000068.1 uncultured Ruminococcus sp. isolate RUG13545 genome assembly, contig: RUG13545_asm_68, whole genome shotgun sequence (6315 bp)
Overview 1 RT 1: 122-3467 bp Neighborhood of RT #1 [122, 3793] RVT-GII YabE AlgX_N_like_3 Feature: gene Location: 122-673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 -566 bp Feature: gene Location: 1280-2341 bp Feature: domain Description: YabE Location: 1310-2195 bp Feature: domain Description: YabE Location: 1 31 0-21 95 bp Feature: gene Location: 2384-3793 bp Feature: domain Description: AlgX_N_like_3 Location: 2576-3467 bp Feature: domain Description: AlgX_N_like_3 Location: 2576-3467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YabE (COG3583), AlgX_N_like_3 (cd14440)

Seq: CADARB010000078.1 uncultured Ruminococcus sp. isolate RUG13545 genome assembly, contig: RUG13545_asm_78, whole genome shotgun sequence (9024 bp)
Overview 1 RT 1: 1556-5712 bp Neighborhood of RT #1 [1556, 5712] RVT-Retrons WYL Feature: gene Location: 1556-1828 bp Feature: gene Location: 2011-2814 bp Feature: gene Location: 3080-4156 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3347-3902 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3347-3902 bp Feature: gene Location: 4189-4572 bp Feature: domain Description: WYL Location: 4270-4414 bp Feature: domain Description: WYL Location: 42 70-4414 bp Feature: gene Location: 4753-5712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WYL (pfam13280)