myRT

myRT report for GCA_902790625.1_Rumen_uncultured_genome_RUG13587

Download annotations/find similar RTs

Seq: CADASP010000007.1 uncultured Prevotellaceae bacterium isolate RUG13587 genome assembly, contig: RUG13587_asm_7, whole genome shotgun sequence (135546 bp)
Overview 1 RT 1: 131778-134744 bp Neighborhood of RT #1 [131778, 135373] HDc RVT-Retrons Feature: gene Location: 131778-132317 bp Feature: domain Description: HDc Location: 131868-132300 bp Feature: domain Description: HDc Location: 1 31 868-1 32300 bp Feature: gene Location: 132962-133930 bp Feature: gene Location: 133934-135373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 134132-134744 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 341 32-1 34744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HDc (smart00471), RVT-Retrons

Seq: CADASP010000011.1 uncultured Prevotellaceae bacterium isolate RUG13587 genome assembly, contig: RUG13587_asm_11, whole genome shotgun sequence (84518 bp)
Overview 1 RT 1: 507-5901 bp Neighborhood of RT #1 [507, 5981] TIGR00295 RVT-UG26 PqqL PqqL Feature: gene Location: 507-1049 bp Feature: domain Description: TIGR00295 Location: 588-942 bp Feature: domain Description: TIGR002 95 Location: 588-942 bp Feature: gene Location: 1066-2277 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1267-1885 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 12 67-1885 bp Feature: gene Location: 2431-2940 bp Feature: gene Location: 3087-5981 bp Feature: domain Description: PqqL Location: 3174-4521 bp Feature: domain Description: PqqL Location: 3174-452 1 bp Feature: domain Description: PqqL Location: 4842-5901 bp Feature: domain Description: PqqL Location: 4842 -5901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR00295 (TIGR00295 family protein), RVT-UG26, PqqL (COG0612)