myRT

myRT report for GCA_902791385.1_Rumen_uncultured_genome_RUG13669

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Seq: CADAVP010000070.1 uncultured Erysipelotrichaceae bacterium isolate RUG13669 genome assembly, contig: RUG13669_asm_70, whole genome shotgun sequence (4659 bp)
Overview 1 RT 1: 2174-4483 bp Neighborhood of RT #1 [2174, 4656] AbiEi_4 RVT-GII GIIM Feature: gene Location: 2174-2668 bp Feature: gene Location: 2661-3287 bp Feature: domain Description: AbiEi_4 Location: 2736-2847 bp Feature: domain Description: AbiEi_4 Location: 2736-2847 bp Feature: gene Location: 3544-4656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3577-4192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3577-41 92 bp Feature: domain Description: GIIM Note: maturase Location: 4252-4483 bp Feature: domain Description: GIIM Note: maturase Location: 4252-4483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEi_4 (pfam13338), RVT-GII, GIIM (pfam08388)

Seq: CADAVP010000078.1 uncultured Erysipelotrichaceae bacterium isolate RUG13669 genome assembly, contig: RUG13669_asm_78, whole genome shotgun sequence (10847 bp)
Overview 1 RT 1: 1290-4174 bp Neighborhood of RT #1 [1290, 4185] MutS_I Avd_like RVT-DGRs PRK06222 Feature: gene Location: 1290-1853 bp Feature: domain Description: MutS_I Location: 1458-1632 bp Feature: domain Description: MutS_I Location: 1458-1632 bp Feature: gene Location: 1840-2196 bp Feature: domain Description: Avd_like Location: 1873-2182 bp Feature: domain Description: Avd_like Location: 1873-2 182 bp Feature: gene Location: 2183-3115 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2351-3083 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 351-3083 bp Feature: gene Location: 3119-3268 bp Feature: gene Location: 3343-4185 bp Feature: domain Description: PRK06222 Location: 3346-4174 bp Feature: domain Description: PRK062 2 2 Location: 3346-4174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), Avd_like (cd16376), RVT-DGRs, PRK06222 (sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein)