myRT

myRT report for GCA_902791865.1_Rumen_uncultured_genome_RUG13712

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Seq: CADAXK010000003.1 uncultured Bacteroidia bacterium isolate RUG13712 genome assembly, contig: RUG13712_asm_3, whole genome shotgun sequence (319418 bp)
Overview 1 RT 1: 239597-249457 bp Neighborhood of RT #1 [239597, 249477] TIGR02436 4helix_suffix DegQ BACON BACON BACON RVT-UG5 COG1373 Bac_rhamnosid_N Bac_rhamnosid Bac_rhamnosid6H Bac_rhamnosid_C Feature: gene Location: 239597-240181 bp Feature: domain Description: TIGR02436 Location: 239681-239885 bp Feature: domain Description: TIGR02436 Location: 239681 -239885 bp Feature: domain Description: 4helix_suffix Location: 240026-240167 bp Feature: domain Description: 4helix_suffix Location: 240026-2401 67 bp Feature: gene Location: 240270-242282 bp Feature: domain Description: DegQ Location: 240447-240978 bp Feature: domain Description: DegQ Location: 240447-240978 bp Feature: domain Description: BACON Location: 241122-241359 bp Feature: domain Description: BACON Location: 241 1 22-241 359 bp Feature: domain Description: BACON Location: 241383-241620 bp Feature: domain Description: BACON Location: 241 383-241 620 bp Feature: domain Description: BACON Location: 241647-241878 bp Feature: domain Description: BACON Location: 241 647-241 878 bp Feature: gene Location: 242302-245028 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 242755-243199 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 242755-2431 99 bp Feature: gene Location: 245604-246734 bp Feature: domain Description: COG1373 Location: 245637-246648 bp Feature: domain Description: COG1 373 Location: 245637-246648 bp Feature: gene Location: 246946-249477 bp Feature: domain Description: Bac_rhamnosid_N Location: 247447-247846 bp Feature: domain Description: Bac_rhamnosid_N Location: 247447-247846 bp Feature: domain Description: Bac_rhamnosid Location: 247939-248215 bp Feature: domain Description: Bac_rhamnosid Location: 247939-24821 5 bp Feature: domain Description: Bac_rhamnosid6H Location: 248233-249238 bp Feature: domain Description: Bac_rhamnosid6H Location: 248233-249238 bp Feature: domain Description: Bac_rhamnosid_C Location: 249247-249457 bp Feature: domain Description: Bac_rhamnosid_C Location: 249247-249457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02436 (four helix bundle protein), 4helix_suffix (TIGR04258), DegQ (pfam08181), BACON (pfam13004), RVT-UG5, COG1373 (Predicted ATPase, AAA+ superfamily ), Bac_rhamnosid_N (pfam08531), Bac_rhamnosid (pfam05592), Bac_rhamnosid6H (pfam17389), Bac_rhamnosid_C (pfam17390)