myRT

myRT report for GCA_902792385.1_Rumen_uncultured_genome_RUG13768

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Seq: CADAZR010000024.1 uncultured Ruminococcus sp. isolate RUG13768 genome assembly, contig: RUG13768_asm_24, whole genome shotgun sequence (23029 bp)
Overview 1 RT 1: 1-3417 bp Neighborhood of RT #1 [1, 3947] HTH_17 RVT-UNC Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 1-480 bp Feature: gene Location: 654-842 bp Feature: domain Description: HTH_17 Location: 678-825 bp Feature: domain Description: HTH_1 7 Location: 678-825 bp Feature: gene Location: 855-2432 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1287-1731 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 287-1 731 bp Feature: gene Location: 2429-2656 bp Feature: domain Description: Resolvase Location: 2441-2642 bp Feature: domain Description: Resolvase Location: 2441 -2642 bp Feature: gene Location: 2697-3947 bp Feature: domain Description: Recombinase Location: 2940-3195 bp Feature: domain Description: Recombinase Location: 2940-31 95 bp Feature: domain Description: Zn_ribbon_recom Location: 3237-3417 bp Feature: domain Description: Zn_ribbon_recom Location: 3237-341 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-UG8/RVT-UG12/RVT-UG15/RVT-UG7(RVT-UNC), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: CADAZR010000031.1 uncultured Ruminococcus sp. isolate RUG13768 genome assembly, contig: RUG13768_asm_31, whole genome shotgun sequence (20782 bp)
Overview 1 RT 1: 18371-20764 bp Neighborhood of RT #1 [18371, 20781] YqfA RVT-GII Feature: gene Location: 18371-19027 bp Feature: domain Description: YqfA Location: 18395-19022 bp Feature: domain Description: YqfA Location: 18395-1902 2 bp Feature: gene Location: 19520-19909 bp Feature: gene Location: 20029-20781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20152-20764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0152 -2 0764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqfA (COG4864), RVT-GII