myRT

myRT report for GCA_902792975.1_Rumen_uncultured_genome_RUG13828

Download annotations/find similar RTs

Seq: CADBBU010000016.1 uncultured Prevotellaceae bacterium isolate RUG13828 genome assembly, contig: RUG13828_asm_16, whole genome shotgun sequence (114211 bp)
Overview 1 RT 1: 86734-95706 bp Neighborhood of RT #1 [86734, 95729] LacZ DUF4982 Glyco_hydro2_C5 PurR RVT-GII GIIM Inhibitor_I69 Peptidase_C10 Por_Secre_tail Feature: gene Location: 86734-89184 bp Feature: domain Description: LacZ Location: 86800-88603 bp Feature: domain Description: LacZ Location: 86800-88603 bp Feature: domain Description: DUF4982 Location: 88645-88828 bp Feature: domain Description: DUF4982 Location: 88645-88828 bp Feature: domain Description: Glyco_hydro2_C5 Location: 88864-89167 bp Feature: domain Description: Glyco_hydro2_C5 Location: 88864-891 67 bp Feature: gene Location: 89189-90205 bp Feature: domain Description: PurR Location: 89210-90197 bp Feature: domain Description: PurR Location: 8921 0-901 97 bp Feature: gene Location: 90605-91963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90950-91556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90950-91 556 bp Feature: domain Description: GIIM Note: maturase Location: 91613-91823 bp Feature: domain Description: GIIM Note: maturase Location: 91 61 3-91 823 bp Feature: gene Location: 91993-92184 bp Feature: gene Location: 92445-95729 bp Feature: domain Description: Inhibitor_I69 Location: 92502-92793 bp Feature: domain Description: Inhibitor_I69 Location: 92502-92793 bp Feature: domain Description: Peptidase_C10 Location: 92901-93465 bp Feature: domain Description: Peptidase_C1 0 Location: 92901 -93465 bp Feature: domain Description: Por_Secre_tail Location: 95595-95706 bp Feature: domain Description: Por_Secre_tail Location: 95595-95706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacZ (COG3250), DUF4982 (pfam16355), Glyco_hydro2_C5 (pfam18565), PurR (COG1609), RVT-GII, GIIM (pfam08388), Inhibitor_I69 (pfam13734), Peptidase_C10 (pfam01640), Por_Secre_tail (TIGR04183)

Seq: CADBBU010000017.1 uncultured Prevotellaceae bacterium isolate RUG13828 genome assembly, contig: RUG13828_asm_17, whole genome shotgun sequence (71043 bp)
Overview 1 RT 1: 7054-11504 bp Neighborhood of RT #1 [7054, 11563] RVT-Retrons Peptidase_S41_CPP UPF0227 YorC Feature: gene Location: 7054-7269 bp Feature: gene Location: 7310-7558 bp Feature: gene Location: 7548-8447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7764-8274 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7764-82 74 bp Feature: gene Location: 8897-10555 bp Feature: domain Description: Peptidase_S41_CPP Location: 8993-10073 bp Feature: domain Description: Peptidase_S41_CPP Location: 8993-10073 bp Feature: gene Location: 10565-11563 bp Feature: domain Description: UPF0227 Location: 10622-11066 bp Feature: domain Description: UPF02 2 7 Location: 1062 2 -11066 bp Feature: domain Description: YorC Location: 11276-11504 bp Feature: domain Description: YorC Location: 112 76-11504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0227 (pfam05728), YorC (COG4502), RVT-Retrons, Peptidase_S41_CPP (cd07560)