myRT

myRT report for GCA_902793335.1_Rumen_uncultured_genome_RUG13856

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Seq: CADBCZ010000033.1 uncultured Lachnospiraceae bacterium isolate RUG13856 genome assembly, contig: RUG13856_asm_33, whole genome shotgun sequence (32559 bp)
Overview 1 RT 1: 28334-32553 bp Neighborhood of RT #1 [28334, 32558] FN3 FN3 CE4_CtAXE_like PurF PurF RVT-GII GIIM RVT-GII Feature: gene Location: 28334-29737 bp Feature: domain Description: FN3 Location: 28616-28829 bp Feature: domain Description: FN3 Location: 2861 6-28829 bp Feature: domain Description: FN3 Location: 28880-29048 bp Feature: domain Description: FN3 Location: 28880-29048 bp Feature: domain Description: CE4_CtAXE_like Location: 29138-29672 bp Feature: domain Description: CE4_CtAXE_like Location: 291 38-29672 bp Feature: gene Location: 30056-31465 bp Feature: domain Description: PurF Location: 30062-31202 bp Feature: domain Description: PurF Location: 30062-31 202 bp Feature: domain Description: PurF Location: 31337-31460 bp Feature: domain Description: PurF Location: 31 337-31 460 bp Feature: gene Location: 31553-32053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31559-31688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 559-31 688 bp Feature: domain Description: GIIM Note: maturase Location: 31748-31961 bp Feature: domain Description: GIIM Note: maturase Location: 31 748-31 961 bp Feature: gene Location: 32085-32558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32169-32553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 69-32553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FN3 (smart00060), CE4_CtAXE_like (cd10954), PurF (COG0034), RVT-GII, GIIM (pfam08388)

Seq: CADBCZ010000078.1 uncultured Lachnospiraceae bacterium isolate RUG13856 genome assembly, contig: RUG13856_asm_78, whole genome shotgun sequence (11573 bp)
Overview 1 RT 1: 1755-7967 bp Neighborhood of RT #1 [1755, 7967] AAA_21 RVT-UG12 AAA_21 AAA_21 Feature: gene Location: 1755-3095 bp Feature: domain Description: AAA_21 Location: 1887-2910 bp Feature: domain Description: AAA_2 1 Location: 1887-2 910 bp Feature: gene Location: 3102-3614 bp Feature: gene Location: 3718-5454 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 4255-4672 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 42 55-4672 bp Feature: gene Location: 6082-7197 bp Feature: domain Description: AAA_21 Location: 6154-6283 bp Feature: domain Description: AAA_2 1 Location: 6154-62 83 bp Feature: domain Description: AAA_21 Location: 6808-7042 bp Feature: domain Description: AAA_2 1 Location: 6808-7042 bp Feature: gene Location: 7194-7967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-UG12