myRT

myRT report for GCA_902793605.1_Rumen_uncultured_genome_RUG13884

Download annotations/find similar RTs

Seq: CADBEB010000001.1 uncultured Clostridiales bacterium isolate RUG13884 genome assembly, contig: RUG13884_asm_1, whole genome shotgun sequence (316284 bp)
Overview 1 RT 1: 188571-192449 bp Neighborhood of RT #1 [188571, 192469] RVT-DGRs Phage_XkdX Feature: gene Location: 188571-190313 bp Feature: gene Location: 190396-190626 bp Feature: gene Location: 190778-192079 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 191081-191666 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 91 081 -1 91 666 bp Feature: gene Location: 192024-192332 bp Feature: gene Location: 192332-192469 bp Feature: domain Description: Phage_XkdX Location: 192341-192449 bp Feature: domain Description: Phage_XkdX Location: 1 92341 -1 92449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: CADBEB010000028.1 uncultured Clostridiales bacterium isolate RUG13884 genome assembly, contig: RUG13884_asm_28, whole genome shotgun sequence (58779 bp)
Overview 1 RT 1: 3635-9633 bp Neighborhood of RT #1 [3635, 9659] MobC DUF3800 RVT-UNC RimI COG2865 Feature: gene Location: 3635-4030 bp Feature: domain Description: MobC Location: 3854-3941 bp Feature: domain Description: MobC Location: 3854-3941 bp Feature: gene Location: 4773-5348 bp Feature: domain Description: DUF3800 Location: 4782-5286 bp Feature: domain Description: DUF3800 Location: 4782 -52 86 bp Feature: gene Location: 5525-7207 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5909-6311 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5909-6311 bp Feature: gene Location: 8296-8886 bp Feature: domain Description: RimI Location: 8470-8737 bp Feature: domain Description: RimI Location: 8470-8737 bp Feature: gene Location: 9264-9659 bp Feature: domain Description: COG2865 Location: 9267-9633 bp Feature: domain Description: COG2 865 Location: 92 67-9633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), DUF3800 (pfam12686), RVT-UG8/RVT-UG12(RVT-UNC), RimI (COG0456), COG2865 (Predicted transcriptional regulator, contains HTH domain )