myRT

myRT report for GCA_902793875.1_Rumen_uncultured_genome_RUG13917

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Seq: CADBFL010000023.1 uncultured Clostridiales bacterium isolate RUG13917 genome assembly, contig: RUG13917_asm_23, whole genome shotgun sequence (22945 bp)
Overview 1 RT 1: 2569-10540 bp Neighborhood of RT #1 [2569, 10563] Endonuclea_NS_2 COG5001 COG5001 RVT-UG26 NHLM_micro_ABC1 NHLM_micro_ABC1 Feature: gene Location: 2569-3615 bp Feature: domain Description: Endonuclea_NS_2 Location: 2980-3340 bp Feature: domain Description: Endonuclea_NS_2 Location: 2980-3340 bp Feature: gene Location: 3844-6531 bp Feature: domain Description: COG5001 Location: 3907-4606 bp Feature: domain Description: COG5001 Location: 3907-4606 bp Feature: domain Description: COG5001 Location: 5878-6211 bp Feature: domain Description: COG5001 Location: 5878-621 1 bp Feature: gene Location: 6528-7787 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 6768-7386 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 6768-7386 bp Feature: gene Location: 8283-9752 bp Feature: domain Description: NHLM_micro_ABC1 Location: 8439-9717 bp Feature: domain Description: NHLM_micro_ABC1 Location: 8439-971 7 bp Feature: gene Location: 9721-10563 bp Feature: domain Description: NHLM_micro_ABC1 Location: 9727-10540 bp Feature: domain Description: NHLM_micro_ABC1 Location: 9727-1 0540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endonuclea_NS_2 (pfam13930), COG5001 (Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain ), RVT-UG26, NHLM_micro_ABC1 (TIGR03796)

Seq: CADBFL010000071.1 uncultured Clostridiales bacterium isolate RUG13917 genome assembly, contig: RUG13917_asm_71, whole genome shotgun sequence (13318 bp)
Overview 1 RT 1: 2494-6969 bp Neighborhood of RT #1 [2494, 6969] DUF3089 RtcB PLDc_unchar6 RVT-UG26 ocin_ocin_ocin_TIGR03798 Feature: gene Location: 2494-2835 bp Feature: domain Description: DUF3089 Location: 2569-2752 bp Feature: domain Description: DUF3089 Location: 2 569-2 752 bp Feature: gene Location: 2920-4035 bp Feature: domain Description: RtcB Location: 3337-4030 bp Feature: domain Description: RtcB Location: 3337-4030 bp Feature: gene Location: 4078-6480 bp Feature: domain Description: PLDc_unchar6 Location: 4792-5143 bp Feature: domain Description: PLDc_unchar6 Location: 4792 -5143 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 5494-6100 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 5494-6100 bp Feature: gene Location: 6543-6782 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 6576-6741 bp Feature: domain Description: ocin_ocin_ocin_TIGR03798 Location: 6576-6741 bp Feature: gene Location: 6781-6969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3089 (pfam11288), RtcB (pfam01139), PLDc_unchar6 (cd09176), RVT-UG26, ocin_ocin_ocin_TIGR03798