myRT

myRT report for GCA_902794355.1_Rumen_uncultured_genome_RUG13965

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Seq: CADBHC010000023.1 uncultured Ruminococcus sp. isolate RUG13965 genome assembly, contig: RUG13965_asm_23, whole genome shotgun sequence (37014 bp)
Overview 1 RT 1: 28657-36387 bp Neighborhood of RT #1 [28657, 37013] COG4932 COG4932 LRR_3 LRR_3 RVT-GII Feature: gene Location: 28657-33300 bp Feature: domain Description: COG4932 Location: 31699-32329 bp Feature: domain Description: COG4932 Location: 31 699-32329 bp Feature: domain Description: COG4932 Location: 32362-33226 bp Feature: domain Description: COG4932 Location: 32362-33226 bp Feature: gene Location: 33385-34677 bp Feature: domain Description: LRR_3 Location: 34123-34426 bp Feature: domain Description: LRR_3 Location: 341 23-34426 bp Feature: domain Description: LRR_3 Location: 34555-34660 bp Feature: domain Description: LRR_3 Location: 34555-34660 bp Feature: gene Location: 35169-37013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35649-36387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35649-36387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4932 (Uncharacterized surface anchored protein ), LRR_3 (sd00036), RVT-GII

Seq: CADBHC010000062.1 uncultured Ruminococcus sp. isolate RUG13965 genome assembly, contig: RUG13965_asm_62, whole genome shotgun sequence (6785 bp)
Overview 1 RT 1: 562-6181 bp Neighborhood of RT #1 [562, 6186] PRK09414 RVT-UG26 BaeS OmpR Feature: gene Location: 562-1893 bp Feature: domain Description: PRK09414 Location: 568-1891 bp Feature: domain Description: PRK09414 Location: 568-1891 bp Feature: gene Location: 2064-2591 bp Feature: gene Location: 2770-3975 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2965-3583 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 2 965-3583 bp Feature: gene Location: 4056-5522 bp Feature: domain Description: BaeS Location: 4587-5520 bp Feature: domain Description: BaeS Location: 4587-552 0 bp Feature: gene Location: 5506-6186 bp Feature: domain Description: OmpR Location: 5515-6181 bp Feature: domain Description: OmpR Location: 5515-6181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09414 (NADP-specific glutamate dehydrogenase), RVT-UG26, BaeS (COG0642), OmpR (COG0745)