myRT

myRT report for GCA_902794555.1_Rumen_uncultured_genome_RUG13983

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Seq: CADBIA010000002.1 uncultured Lachnospiraceae bacterium isolate RUG13983 genome assembly, contig: RUG13983_asm_2, whole genome shotgun sequence (39936 bp)
Overview 1 RT 1: 32850-38247 bp Neighborhood of RT #1 [32850, 38303] RVT-DGRs INT_ICEBs1_C_like INT_ICEBs1_C_like Feature: gene Location: 32850-34688 bp Feature: gene Location: 34775-35011 bp Feature: gene Location: 35080-36270 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35344-35926 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35344-35926 bp Feature: gene Location: 36221-36469 bp Feature: gene Location: 37305-38303 bp Feature: domain Description: INT_ICEBs1_C_like Location: 37824-38055 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 37824-38055 bp Feature: domain Description: INT_ICEBs1_C_like Location: 38058-38247 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 38058-38247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, INT_ICEBs1_C_like (cd01189)

Seq: CADBIA010000008.1 uncultured Lachnospiraceae bacterium isolate RUG13983 genome assembly, contig: RUG13983_asm_8, whole genome shotgun sequence (20840 bp)
Overview 1 RT 1: 15668-20777 bp Neighborhood of RT #1 [15668, 20777] Resolvase Recombinase Zn_ribbon_recom Zn_ribbon_recom Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM Feature: gene Location: 15668-17461 bp Feature: domain Description: Resolvase Location: 15728-16169 bp Feature: domain Description: Resolvase Location: 1572 8-16169 bp Feature: domain Description: Recombinase Location: 16241-16562 bp Feature: domain Description: Recombinase Location: 162 41-16562 bp Feature: domain Description: Zn_ribbon_recom Location: 16610-16790 bp Feature: domain Description: Zn_ribbon_recom Location: 16610-16790 bp Feature: domain Description: Zn_ribbon_recom Location: 17024-17186 bp Feature: domain Description: Zn_ribbon_recom Location: 1702 4-17186 bp Feature: gene Location: 17440-19023 bp Feature: domain Description: Resolvase Location: 17530-17974 bp Feature: domain Description: Resolvase Location: 17530-17974 bp Feature: domain Description: Recombinase Location: 18046-18367 bp Feature: domain Description: Recombinase Location: 18046-18367 bp Feature: domain Description: Zn_ribbon_recom Location: 18406-18583 bp Feature: domain Description: Zn_ribbon_recom Location: 18406-18583 bp Feature: gene Location: 19172-20470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19430-20120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19430-2 012 0 bp Feature: domain Description: GIIM Note: maturase Location: 20204-20396 bp Feature: domain Description: GIIM Note: maturase Location: 2 02 04-2 0396 bp Feature: gene Location: 20565-20777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388)