myRT

myRT report for GCA_902794845.1_Rumen_uncultured_genome_RUG14018

Download annotations/find similar RTs

Seq: CADBJB010000004.1 uncultured Erysipelotrichaceae bacterium isolate RUG14018 genome assembly, contig: RUG14018_asm_4, whole genome shotgun sequence (91354 bp)
Overview 1 RT 1: 23318-26562 bp Neighborhood of RT #1 [23318, 26562] Phage_XkdX RVT-DGRs Feature: gene Location: 23318-23476 bp Feature: domain Description: Phage_XkdX Location: 23324-23444 bp Feature: domain Description: Phage_XkdX Location: 23324-23444 bp Feature: gene Location: 23476-23745 bp Feature: gene Location: 23702-24856 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23957-24560 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23957-24560 bp Feature: gene Location: 25041-25244 bp Feature: gene Location: 25258-26562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: CADBJB010000028.1 uncultured Erysipelotrichaceae bacterium isolate RUG14018 genome assembly, contig: RUG14018_asm_28, whole genome shotgun sequence (29564 bp)
Overview 1 RT 1: 16026-20304 bp Neighborhood of RT #1 [16026, 20315] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII PhnK Feature: gene Location: 16026-17012 bp Feature: domain Description: INT_RitB_C_like Location: 16365-16944 bp Feature: domain Description: INT_RitB_C_like Location: 16365-16944 bp Feature: gene Location: 17015-18235 bp Feature: domain Description: Phage_int_SAM_1 Location: 17384-17588 bp Feature: domain Description: Phage_int_SAM_1 Location: 17384-17588 bp Feature: domain Description: INT_RitA_C_like Location: 17684-18218 bp Feature: domain Description: INT_RitA_C_like Location: 17684-182 18 bp Feature: gene Location: 18334-18975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18541-18922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18541-1892 2 bp Feature: gene Location: 19283-19447 bp Feature: gene Location: 19530-20315 bp Feature: domain Description: PhnK Location: 19533-20304 bp Feature: domain Description: PhnK Location: 19533-2 0304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, PhnK (COG4107)