myRT

myRT report for GCA_902794885.1_Rumen_uncultured_genome_RUG14021

Download annotations/find similar RTs

Seq: CADBJG010000028.1 Ruminococcus flavefaciens isolate RUG14021 genome assembly, contig: RUG14021_asm_28, whole genome shotgun sequence (29699 bp)
Overview 1 RT 1: 1899-5180 bp Neighborhood of RT #1 [1899, 5180] INT_ICEBs1_C_like RVT-UG26 Feature: gene Location: 1899-2288 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1902-2205 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 902-2205 bp Feature: gene Location: 2417-2932 bp Feature: gene Location: 3122-4312 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3317-3935 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 331 7-3935 bp Feature: gene Location: 4479-4988 bp Feature: gene Location: 5013-5180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-UG26

Seq: CADBJG010000117.1 Ruminococcus flavefaciens isolate RUG14021 genome assembly, contig: RUG14021_asm_117, whole genome shotgun sequence (11236 bp)
Overview 1 RT 1: 7365-11234 bp Neighborhood of RT #1 [7365, 11234] RVT-Retrons MdlB Feature: gene Location: 7365-7667 bp Feature: gene Location: 7942-8820 bp Feature: gene Location: 8983-10116 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9163-9730 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9163-9730 bp Feature: gene Location: 10199-11023 bp Feature: domain Description: MdlB Location: 10247-10985 bp Feature: domain Description: MdlB Location: 102 47-10985 bp Feature: gene Location: 11094-11234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MdlB (COG1132)

Seq: CADBJG010000320.1 Ruminococcus flavefaciens isolate RUG14021 genome assembly, contig: RUG14021_asm_320, whole genome shotgun sequence (2430 bp)
Overview 1 RT 1: 2-1853 bp Neighborhood of RT #1 [2, 2194] DEDDh RVT-UG2 Feature: gene Location: 2-379 bp Feature: domain Description: DEDDh Location: 95-305 bp Feature: domain Description: DEDDh Location: 95-3 05 bp Feature: gene Location: 422-700 bp Feature: gene Location: 818-2194 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1013-1853 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1013 -1853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDDh (cd06127), RVT-UG2