myRT

myRT report for GCA_902795285.1_Rumen_uncultured_genome_RUG14051

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Seq: CADBKR010000001.1 uncultured Prevotellaceae bacterium isolate RUG14051 genome assembly, contig: RUG14051_asm_1, whole genome shotgun sequence (36243 bp)
Overview 1 RT 1: 33939-36075 bp Neighborhood of RT #1 [33939, 36242] RplQ RVT-GII GIIM Feature: gene Location: 33939-34433 bp Feature: domain Description: RplQ Location: 33942-34293 bp Feature: domain Description: RplQ Location: 33942-34293 bp Feature: gene Location: 34595-34834 bp Feature: gene Location: 34851-36242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35193-35811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 93-3581 1 bp Feature: domain Description: GIIM Note: maturase Location: 35868-36075 bp Feature: domain Description: GIIM Note: maturase Location: 35868-36075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RplQ (COG0203), RVT-GII, GIIM (pfam08388)

Seq: CADBKR010000263.1 uncultured Prevotellaceae bacterium isolate RUG14051 genome assembly, contig: RUG14051_asm_263, whole genome shotgun sequence (3761 bp)
Overview 1 RT 1: 3-3009 bp Neighborhood of RT #1 [3, 3599] SusD 2-Hacid_dh_4 RVT-Retrons Feature: gene Location: 3-818 bp Feature: domain Description: SusD Location: 12-753 bp Feature: domain Description: SusD Location: 12 -753 bp Feature: gene Location: 940-1902 bp Feature: domain Description: 2-Hacid_dh_4 Location: 949-1870 bp Feature: domain Description: 2 -Hacid_dh_4 Location: 949-1870 bp Feature: gene Location: 2163-3599 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2427-3009 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 42 7-3009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, SusD (NF033071), 2-Hacid_dh_4 (cd12162)