myRT

myRT report for GCA_902795565.1_Rumen_uncultured_genome_RUG14082

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Seq: CADBLR010000067.1 uncultured Lachnospiraceae bacterium isolate RUG14082 genome assembly, contig: RUG14082_asm_67, whole genome shotgun sequence (22074 bp)
Overview 1 RT 1: 17200-21892 bp Neighborhood of RT #1 [17200, 22071] slmA TetR_C_8 YhgE YhgE RVT-GII GIIM Feature: gene Location: 17200-17841 bp Feature: domain Description: slmA Location: 17230-17476 bp Feature: domain Description: slmA Location: 1 7230-1 7476 bp Feature: domain Description: TetR_C_8 Location: 17491-17770 bp Feature: domain Description: TetR_C_8 Location: 1 7491 -1 7770 bp Feature: gene Location: 18087-20975 bp Feature: domain Description: YhgE Location: 18180-19098 bp Feature: domain Description: YhgE Location: 1 81 80-1 9098 bp Feature: domain Description: YhgE Location: 19122-20928 bp Feature: domain Description: YhgE Location: 1 91 22-20928 bp Feature: gene Location: 21046-22071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21049-21619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 049-21 61 9 bp Feature: domain Description: GIIM Note: maturase Location: 21676-21892 bp Feature: domain Description: GIIM Note: maturase Location: 21 676-21 892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT slmA (PRK09480), TetR_C_8 (pfam14278), YhgE (COG1511), RVT-GII, GIIM (pfam08388)