myRT

myRT report for GCA_902795775.1_Rumen_uncultured_genome_RUG14105

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Seq: CADBMP010000026.1 uncultured Lachnospiraceae bacterium isolate RUG14105 genome assembly, contig: RUG14105_asm_26, whole genome shotgun sequence (7081 bp)
Overview 1 RT 1: 2-3104 bp Neighborhood of RT #1 [2, 3104] RVT-DGRs Avd_like Avd_like Feature: gene Location: 2-475 bp Feature: gene Location: 491-1660 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 740-1358 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 740-1 358 bp Feature: gene Location: 1924-2661 bp Feature: domain Description: Avd_like Location: 1984-2275 bp Feature: domain Description: Avd_like Location: 1 984-2275 bp Feature: domain Description: Avd_like Location: 2362-2617 bp Feature: domain Description: Avd_like Location: 2362-261 7 bp Feature: gene Location: 2679-3104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: CADBMP010000063.1 uncultured Lachnospiraceae bacterium isolate RUG14105 genome assembly, contig: RUG14105_asm_63, whole genome shotgun sequence (3232 bp)
Overview 1 RT 1: 1193-3230 bp Neighborhood of RT #1 [1193, 3230] Avd_like RVT-DGRs Feature: gene Location: 1193-1633 bp Feature: domain Description: Avd_like Location: 1274-1610 bp Feature: domain Description: Avd_like Location: 12 74-1610 bp Feature: gene Location: 1701-1928 bp Feature: gene Location: 1961-2470 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1964-2213 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1964-2 2 13 bp Feature: gene Location: 2507-2872 bp Feature: gene Location: 3018-3230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: CADBMP010000244.1 uncultured Lachnospiraceae bacterium isolate RUG14105 genome assembly, contig: RUG14105_asm_244, whole genome shotgun sequence (8936 bp)
Overview 1 RT 1: 71-2262 bp Neighborhood of RT #1 [71, 2262] RVT_N RVT-GII Ape1-like_AP-endo Feature: gene Location: 71-757 bp Feature: domain Description: RVT_N Location: 116-350 bp Feature: domain Description: RVT_N Location: 116-3 50 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-73 7 bp Feature: gene Location: 757-1518 bp Feature: domain Description: Ape1-like_AP-endo Location: 760-1510 bp Feature: domain Description: Ape1-like_AP-endo Location: 760-1510 bp Feature: gene Location: 1612-2262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, Ape1-like_AP-endo (cd09087)

Seq: CADBMP010000273.1 uncultured Lachnospiraceae bacterium isolate RUG14105 genome assembly, contig: RUG14105_asm_273, whole genome shotgun sequence (5205 bp)
Overview 1 RT 1: 2168-5080 bp Neighborhood of RT #1 [2168, 5080] WYL RVT-GII GIIM Feature: gene Location: 2168-2896 bp Feature: domain Description: WYL Location: 2339-2870 bp Feature: domain Description: WYL Location: 2339-2870 bp Feature: gene Location: 2933-3265 bp Feature: gene Location: 3312-4694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363-3546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363-354 6 bp Feature: domain Description: GIIM Note: maturase Location: 3609-3837 bp Feature: domain Description: GIIM Note: maturase Location: 3609-3837 bp Feature: gene Location: 4850-5080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-GII, GIIM (pfam08388)