myRT

myRT report for GCA_902798335.1_Rumen_uncultured_genome_RUG14349

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Seq: CADBVW010000026.1 uncultured Methanobrevibacter sp. isolate RUG14349 genome assembly, contig: RUG14349_asm_26, whole genome shotgun sequence (29664 bp)
Overview 1 RT 1: 196-3823 bp Neighborhood of RT #1 [196, 4587] RVT_N RVT-GII GIIM Peptidase_C71 AAA_15 Feature: gene Location: 196-579 bp Feature: gene Location: 644-2167 bp Feature: RT Description: RVT_N Location: 713-959 bp Feature: RT Description: RVT_N Location: 71 3-959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1013-1670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 3-1 670 bp Feature: domain Description: GIIM Note: maturase Location: 1733-1967 bp Feature: domain Description: GIIM Note: maturase Location: 1 733-1 967 bp Feature: gene Location: 2241-2525 bp Feature: domain Description: Peptidase_C71 Location: 2298-2517 bp Feature: domain Description: Peptidase_C71 Location: 2298-251 7 bp Feature: gene Location: 2677-4587 bp Feature: domain Description: AAA_15 Location: 2752-3823 bp Feature: domain Description: AAA_1 5 Location: 2752-3823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C71 (pfam12386), AAA_15 (pfam13175), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CADBVW010000028.1 uncultured Methanobrevibacter sp. isolate RUG14349 genome assembly, contig: RUG14349_asm_28, whole genome shotgun sequence (32908 bp)
Overview 1 RT 1: 26020-32891 bp Neighborhood of RT #1 [26020, 32905] InsQ RVT_N RVT-GII GIIM Big_2 Big_2 Big_2 Big_2 Big_2 Big_2 Big_3_5 Big_3_5 PG_binding_1 Feature: gene Location: 26020-27021 bp Feature: domain Description: InsQ Location: 26329-26998 bp Feature: domain Description: InsQ Location: 2 632 9-2 6998 bp Feature: gene Location: 27132-27263 bp Feature: gene Location: 27880-29412 bp Feature: RT Description: RVT_N Location: 27958-28204 bp Feature: RT Description: RVT_N Location: 2 7958-2 82 04 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28258-28915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 58-2 8915 bp Feature: domain Description: GIIM Note: maturase Location: 28978-29212 bp Feature: domain Description: GIIM Note: maturase Location: 2 8978-2 92 12 bp Feature: gene Location: 29915-32905 bp Feature: domain Description: Big_2 Location: 30590-30767 bp Feature: domain Description: Big_2 Location: 30590-30767 bp Feature: domain Description: Big_2 Location: 30875-31025 bp Feature: domain Description: Big_2 Location: 30875-3102 5 bp Feature: domain Description: Big_2 Location: 31097-31277 bp Feature: domain Description: Big_2 Location: 31097-312 77 bp Feature: domain Description: Big_2 Location: 31355-31544 bp Feature: domain Description: Big_2 Location: 31355-31544 bp Feature: domain Description: Big_2 Location: 31604-31787 bp Feature: domain Description: Big_2 Location: 31604-31787 bp Feature: domain Description: Big_2 Location: 31865-32060 bp Feature: domain Description: Big_2 Location: 31865-32 060 bp Feature: domain Description: Big_3_5 Location: 32150-32396 bp Feature: domain Description: Big_3_5 Location: 32 150-32 396 bp Feature: domain Description: Big_3_5 Location: 32486-32669 bp Feature: domain Description: Big_3_5 Location: 32 486-32 669 bp Feature: domain Description: PG_binding_1 Location: 32714-32891 bp Feature: domain Description: PG_binding_1 Location: 32 714-32 891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Big_2 (pfam02368), Big_3_5 (pfam16640), PG_binding_1 (pfam01471)