myRT

myRT report for GCA_902798445.1_Rumen_uncultured_genome_RUG14381

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Seq: CADBWY010000001.1 uncultured Bacteroidia bacterium isolate RUG14381 genome assembly, contig: RUG14381_asm_1, whole genome shotgun sequence (51537 bp)
Overview 1 RT 1: 17675-22336 bp Neighborhood of RT #1 [17675, 22336] RVT-DGRs Avd_like Feature: gene Location: 17675-17992 bp Feature: gene Location: 18433-19050 bp Feature: gene Location: 19092-20483 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19437-20166 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 9437-201 66 bp Feature: gene Location: 20493-20957 bp Feature: domain Description: Avd_like Location: 20541-20853 bp Feature: domain Description: Avd_like Location: 20541 -20853 bp Feature: gene Location: 21014-22336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: CADBWY010000051.1 uncultured Bacteroidia bacterium isolate RUG14381 genome assembly, contig: RUG14381_asm_51, whole genome shotgun sequence (27711 bp)
Overview 1 RT 1: 18965-22527 bp Neighborhood of RT #1 [18965, 22527] GH130_BT3780-like RVT-UG26 Feature: gene Location: 18965-19963 bp Feature: domain Description: GH130_BT3780-like Location: 18971-19919 bp Feature: domain Description: GH130_BT3780-like Location: 18971-19919 bp Feature: gene Location: 19969-20115 bp Feature: gene Location: 20151-21353 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 20352-20967 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 2 0352 -2 0967 bp Feature: gene Location: 21502-22053 bp Feature: gene Location: 22393-22527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GH130_BT3780-like (cd18610), RVT-UG26

Seq: CADBWY010000191.1 uncultured Bacteroidia bacterium isolate RUG14381 genome assembly, contig: RUG14381_asm_191, whole genome shotgun sequence (3827 bp)
Overview 1 RT 1: 323-3208 bp Neighborhood of RT #1 [323, 3441] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 323-1876 bp Feature: domain Description: DDE_Tnp_1 Location: 923-1529 bp Feature: domain Description: DDE_Tnp_1 Location: 923 -1529 bp Feature: gene Location: 2116-3441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2317-2932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 17-293 2 bp Feature: domain Description: GIIM Note: maturase Location: 2995-3208 bp Feature: domain Description: GIIM Note: maturase Location: 2995-3 208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: CADBWY010000302.1 uncultured Bacteroidia bacterium isolate RUG14381 genome assembly, contig: RUG14381_asm_302, whole genome shotgun sequence (2106 bp)
Overview 1 RT 1: 244-1770 bp Neighborhood of RT #1 [244, 1770] RVT-GII GIIM Feature: gene Location: 244-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 5-1063 bp Feature: domain Description: GIIM Note: maturase Location: 1123-1336 bp Feature: domain Description: GIIM Note: maturase Location: 1123-1336 bp Feature: gene Location: 1573-1770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)