myRT

myRT report for GCA_902798975.1_Rumen_uncultured_genome_RUG14425

Download annotations/find similar RTs

Seq: CADBYT010000001.1 uncultured Bacteroidia bacterium isolate RUG14425 genome assembly, contig: RUG14425_asm_1, whole genome shotgun sequence (157888 bp)
Overview 1 RT 1: 54148-59344 bp Neighborhood of RT #1 [54148, 59352] PagL RVT-UG26 obgE LCB5 Feature: gene Location: 54148-55341 bp Feature: domain Description: PagL Location: 54514-54772 bp Feature: domain Description: PagL Location: 5451 4-54772 bp Feature: gene Location: 55399-55920 bp Feature: gene Location: 56066-57265 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 56267-56882 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 56267-56882 bp Feature: gene Location: 57278-58267 bp Feature: domain Description: obgE Location: 57293-58256 bp Feature: domain Description: obgE Location: 57293-58256 bp Feature: gene Location: 58339-59352 bp Feature: domain Description: LCB5 Location: 58432-59344 bp Feature: domain Description: LCB5 Location: 58432-59344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PagL (pfam09411), RVT-UG26, obgE (PRK12299), LCB5 (COG1597)

Seq: CADBYT010000007.1 uncultured Bacteroidia bacterium isolate RUG14425 genome assembly, contig: RUG14425_asm_7, whole genome shotgun sequence (159558 bp)
Overview 1 RT 1: 2-3958 bp Neighborhood of RT #1 [2, 4878] RVT-Retrons PRK04914 PRK04914 Feature: gene Location: 2-979 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8-212 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8-2 12 bp Feature: gene Location: 976-1974 bp Feature: gene Location: 2023-4878 bp Feature: domain Description: PRK04914 Location: 2089-2713 bp Feature: domain Description: PRK04914 Location: 2 089-2 713 bp Feature: domain Description: PRK04914 Location: 3487-3958 bp Feature: domain Description: PRK04914 Location: 3487-3958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK04914 (RNA polymerase-associated protein RapA)