myRT

myRT report for GCA_902799195.1_Rumen_uncultured_genome_RUG14443

Download annotations/find similar RTs

Seq: CADBZP010000015.1 uncultured Prevotellaceae bacterium isolate RUG14443 genome assembly, contig: RUG14443_asm_15, whole genome shotgun sequence (64103 bp)
Overview 1 RT 1: 51467-55148 bp Neighborhood of RT #1 [51467, 55189] DUF4407 RVT-UNC KOG1546 sigma70-ECF Feature: gene Location: 51467-52453 bp Feature: domain Description: DUF4407 Location: 51518-52388 bp Feature: domain Description: DUF4407 Location: 51 51 8-52388 bp Feature: gene Location: 52468-53031 bp Feature: gene Location: 53070-53612 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 53361-53493 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 53361 -53493 bp Feature: gene Location: 53728-54603 bp Feature: domain Description: KOG1546 Location: 53800-54256 bp Feature: domain Description: KOG1 546 Location: 53800-54256 bp Feature: gene Location: 54605-55189 bp Feature: domain Description: sigma70-ECF Location: 54668-55148 bp Feature: domain Description: sigma70-ECF Location: 54668-551 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4407 (pfam14362), RVT-DGRs/RVT-UG10/RVT-GII/RVT-UG2(RVT-UNC), KOG1546 (KOG1546, Metacaspase involved in regulation of apoptosis ), sigma70-ECF (TIGR02937)

Seq: CADBZP010000023.1 uncultured Prevotellaceae bacterium isolate RUG14443 genome assembly, contig: RUG14443_asm_23, whole genome shotgun sequence (67655 bp)
Overview 1 RT 1: 56333-59506 bp Neighborhood of RT #1 [56333, 59523] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 56333-56716 bp Feature: gene Location: 56722-56871 bp Feature: gene Location: 56904-58040 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57087-57780 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57087-57780 bp Feature: gene Location: 58282-58677 bp Feature: domain Description: Avd_like Location: 58321-58639 bp Feature: domain Description: Avd_like Location: 5832 1-58639 bp Feature: gene Location: 58747-59523 bp Feature: domain Description: DUF1566 Location: 59116-59506 bp Feature: domain Description: DUF1566 Location: 59116-59506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: CADBZP010000034.1 uncultured Prevotellaceae bacterium isolate RUG14443 genome assembly, contig: RUG14443_asm_34, whole genome shotgun sequence (45858 bp)
Overview 1 RT 1: 30832-34341 bp Neighborhood of RT #1 [30832, 34355] PHA00447 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 30832-31293 bp Feature: domain Description: PHA00447 Location: 30841-31195 bp Feature: domain Description: PHA00447 Location: 3 0841-3 1195 bp Feature: gene Location: 31277-31555 bp Feature: gene Location: 31616-32857 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31793-32501 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 1793 -3 2501 bp Feature: gene Location: 33070-33507 bp Feature: domain Description: Avd_like Location: 33166-33475 bp Feature: domain Description: Avd_like Location: 3 3 166-3 3 475 bp Feature: gene Location: 33594-34355 bp Feature: domain Description: DUF1566 Location: 34089-34341 bp Feature: domain Description: DUF1566 Location: 3 4089-3 43 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00447 (lysozyme), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)