myRT

myRT report for GCA_902799275.1_Rumen_uncultured_genome_RUG14458

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Seq: CADBZS010000020.1 uncultured Bacteroidetes bacterium isolate RUG14458 genome assembly, contig: RUG14458_asm_20, whole genome shotgun sequence (59971 bp)
Overview 1 RT 1: 16776-31912 bp Neighborhood of RT #1 [16776, 31956] WYL RVT-Retrons rpsA RpsA HATPase_c_3 RVT-Retrons DnaB DnaB TIGR00730 Feature: gene Location: 16776-17030 bp Feature: gene Location: 17034-18035 bp Feature: domain Description: WYL Location: 17487-18015 bp Feature: domain Description: WYL Location: 1 7487-1 801 5 bp Feature: gene Location: 18325-19524 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18556-19120 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 8556-1 91 20 bp Feature: gene Location: 19571-20449 bp Feature: gene Location: 20470-25584 bp Feature: domain Description: rpsA Location: 20482-20749 bp Feature: domain Description: rpsA Location: 20482-20749 bp Feature: domain Description: RpsA Location: 20752-21019 bp Feature: domain Description: RpsA Location: 20752-21 01 9 bp Feature: domain Description: HATPase_c_3 Location: 21460-21664 bp Feature: domain Description: HATPase_c_3 Location: 21 460-21 664 bp Feature: gene Location: 27387-28850 bp Feature: gene Location: 28910-29227 bp Feature: gene Location: 29220-30356 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29463-30048 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29463-30048 bp Feature: gene Location: 30353-31291 bp Feature: domain Description: DnaB Location: 30398-30605 bp Feature: domain Description: DnaB Location: 30398-30605 bp Feature: domain Description: DnaB Location: 30731-31208 bp Feature: domain Description: DnaB Location: 30731 -31 208 bp Feature: gene Location: 31369-31956 bp Feature: domain Description: TIGR00730 Location: 31384-31912 bp Feature: domain Description: TIGR00730 Location: 31 384-31 91 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-Retrons, rpsA (TIGR00717), RpsA (COG0539), HATPase_c_3 (pfam13589), DnaB (TIGR00665), TIGR00730 (TIGR00730 family protein)