myRT

myRT report for GCA_902799765.1_Rumen_uncultured_genome_RUG14503

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Seq: CADCBZ010000001.1 uncultured Prevotellaceae bacterium isolate RUG14503 genome assembly, contig: RUG14503_asm_1, whole genome shotgun sequence (116960 bp)
Overview 1 RT 1: 12272-18652 bp Neighborhood of RT #1 [12272, 18652] mtlR DEDD_Tnp_IS110 RVT-Retrons Feature: gene Location: 12272-13156 bp Feature: domain Description: mtlR Location: 12341-12608 bp Feature: domain Description: mtlR Location: 1 2341 -1 2608 bp Feature: gene Location: 13190-13981 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 13235-13664 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 1 3235-1 3664 bp Feature: gene Location: 14182-15348 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14467-15100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4467-1 51 00 bp Feature: gene Location: 15381-16661 bp Feature: gene Location: 16658-18652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mtlR (PRK11001), DEDD_Tnp_IS110 (pfam01548), RVT-Retrons

Seq: CADCBZ010000012.1 uncultured Prevotellaceae bacterium isolate RUG14503 genome assembly, contig: RUG14503_asm_12, whole genome shotgun sequence (246152 bp)
Overview 1 RT 1: 202012-206444 bp 2 RT 2: 241807-246140 bp Neighborhood of RT #1 [202012, 206444] RVT-DGRs RVT-DGRs Neighborhood of RT #2 [241807, 246151] RpoD PRK05901 SprT-like RVT-UG28b SprT-like IstB_IS21 Feature: gene Location: 202012-203487 bp Feature: gene Location: 203613-203957 bp Feature: gene Location: 203973-205619 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 204180-204693 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 04180-2 04693 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 204702-204924 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 04702 -2 0492 4 bp Feature: gene Location: 205623-206024 bp Feature: gene Location: 206202-206444 bp Feature: gene Location: 241807-242517 bp Feature: domain Description: RpoD Location: 241843-242176 bp Feature: domain Description: RpoD Location: 2 41843-2 42 176 bp Feature: domain Description: PRK05901 Location: 242221-242470 bp Feature: domain Description: PRK05901 Location: 2 42 2 2 1-2 42 470 bp Feature: gene Location: 242582-243025 bp Feature: domain Description: SprT-like Location: 242609-242909 bp Feature: domain Description: SprT-like Location: 2 42 609-2 42 909 bp Feature: gene Location: 243384-245024 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 243834-244566 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 2 43834-2 44566 bp Feature: gene Location: 245046-245465 bp Feature: domain Description: SprT-like Location: 245166-245412 bp Feature: domain Description: SprT-like Location: 2 45166-2 45412 bp Feature: gene Location: 245600-246151 bp Feature: domain Description: IstB_IS21 Location: 245672-246140 bp Feature: domain Description: IstB_IS2 1 Location: 2 45672 -2 46140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RpoD (COG0568), PRK05901 (RNA polymerase sigma factor; Provisional), SprT-like (pfam10263), RVT-UG28b, IstB_IS21 (pfam01695)

Seq: CADCBZ010000090.1 uncultured Prevotellaceae bacterium isolate RUG14503 genome assembly, contig: RUG14503_asm_90, whole genome shotgun sequence (8888 bp)
Overview 1 RT 1: 114-3624 bp Neighborhood of RT #1 [114, 3624] DUF4372 DDE_Tnp_1 RVT-Retrons Feature: gene Location: 114-704 bp Feature: domain Description: DUF4372 Location: 138-354 bp Feature: domain Description: DUF43 72 Location: 13 8-3 54 bp Feature: domain Description: DDE_Tnp_1 Location: 504-693 bp Feature: domain Description: DDE_Tnp_1 Location: 504-693 bp Feature: gene Location: 801-1046 bp Feature: gene Location: 1154-2272 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1454-2006 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1454-2006 bp Feature: gene Location: 2408-2701 bp Feature: gene Location: 2707-3624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4372 (pfam14294), DDE_Tnp_1 (pfam01609), RVT-Retrons