myRT

myRT report for GCA_902800025.1_Rumen_uncultured_genome_RUG14536

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Seq: CADCDA010000001.1 uncultured Erysipelotrichaceae bacterium isolate RUG14536 genome assembly, contig: RUG14536_asm_1, whole genome shotgun sequence (298446 bp)
Overview 1 RT 1: 192485-196500 bp Neighborhood of RT #1 [192485, 196589] rmlC RVT-Retrons Prok-JAB Feature: gene Location: 192485-193216 bp Feature: gene Location: 193209-193763 bp Feature: domain Description: rmlC Location: 193236-193752 bp Feature: domain Description: rmlC Location: 1 93236-1 93752 bp Feature: gene Location: 193814-194755 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 193919-194480 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9391 9-1 94480 bp Feature: gene Location: 194742-195776 bp Feature: gene Location: 196131-196589 bp Feature: domain Description: Prok-JAB Location: 196152-196500 bp Feature: domain Description: Prok-JAB Location: 1 961 52-1 96500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rmlC (TIGR01221), RVT-Retrons, Prok-JAB (pfam14464)

Seq: CADCDA010000008.1 uncultured Erysipelotrichaceae bacterium isolate RUG14536 genome assembly, contig: RUG14536_asm_8, whole genome shotgun sequence (68435 bp)
Overview 1 RT 1: 20962-27294 bp Neighborhood of RT #1 [20962, 27299] RtcB RtcB PLDc_Tdp1_1 PLDc_unchar6 RVT-UG26 RsbU HATPase_c_2 STAS_anti-anti-sigma_factors Feature: gene Location: 20962-22080 bp Feature: domain Description: RtcB Location: 21076-21265 bp Feature: domain Description: RtcB Location: 2 1076-2 12 65 bp Feature: domain Description: RtcB Location: 21358-22057 bp Feature: domain Description: RtcB Location: 2 1358-2 2 057 bp Feature: gene Location: 22097-22336 bp Feature: gene Location: 22581-24785 bp Feature: domain Description: PLDc_Tdp1_1 Location: 22641-22962 bp Feature: domain Description: PLDc_Tdp1_1 Location: 2 2 641-2 2 962 bp Feature: domain Description: PLDc_unchar6 Location: 23193-23487 bp Feature: domain Description: PLDc_unchar6 Location: 2 3193-2 3487 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 23808-24417 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 2 3808-2 4417 bp Feature: gene Location: 24819-26990 bp Feature: domain Description: RsbU Location: 25851-26592 bp Feature: domain Description: RsbU Location: 2 5851-2 6592 bp Feature: domain Description: HATPase_c_2 Location: 26652-26958 bp Feature: domain Description: HATPase_c_2 Location: 2 6652 -2 6958 bp Feature: gene Location: 27003-27299 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 27024-27294 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 2 702 4-2 72 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RtcB (pfam01139), PLDc_Tdp1_1 (cd09122), PLDc_unchar6 (cd09176), RVT-UG26, RsbU (COG2208), HATPase_c_2 (pfam13581), STAS_anti-anti-sigma_factors (cd07043)