myRT

myRT report for GCA_902800045.1_Rumen_uncultured_genome_RUG14538

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Seq: CADCCZ010000001.1 uncultured Bacteroidia bacterium isolate RUG14538 genome assembly, contig: RUG14538_asm_1, whole genome shotgun sequence (1386829 bp)
Overview 1 RT 1: 526217-529068 bp Neighborhood of RT #1 [526217, 529100] RVT-DGRs Phage_holin_4_1 DUF1660 Feature: gene Location: 526217-526660 bp Feature: gene Location: 526662-526910 bp Feature: gene Location: 526879-528207 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 527134-527719 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5271 34-52771 9 bp Feature: gene Location: 528219-528737 bp Feature: domain Description: Phage_holin_4_1 Location: 528279-528564 bp Feature: domain Description: Phage_holin_4_1 Location: 528279-528564 bp Feature: gene Location: 528894-529100 bp Feature: domain Description: DUF1660 Location: 528918-529068 bp Feature: domain Description: DUF1 660 Location: 52891 8-529068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105), DUF1660 (pfam07874)

Seq: CADCCZ010000002.1 uncultured Bacteroidia bacterium isolate RUG14538 genome assembly, contig: RUG14538_asm_2, whole genome shotgun sequence (472839 bp)
Overview 1 RT 1: 450176-455988 bp Neighborhood of RT #1 [450176, 456227] REC REC RVT-Retrons retropepsin_like WG_beta_rep WG_beta_rep Feature: gene Location: 450176-452014 bp Feature: domain Description: REC Location: 450314-450596 bp Feature: domain Description: REC Location: 450314-450596 bp Feature: domain Description: REC Location: 451199-451373 bp Feature: domain Description: REC Location: 451199-451373 bp Feature: gene Location: 452014-452595 bp Feature: gene Location: 452601-454922 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 452934-453516 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 452 934-453516 bp Feature: gene Location: 455157-455645 bp Feature: domain Description: retropepsin_like Location: 455280-455511 bp Feature: domain Description: retropepsin_like Location: 4552 80-455511 bp Feature: gene Location: 455718-456227 bp Feature: domain Description: WG_beta_rep Location: 455802-455895 bp Feature: domain Description: WG_beta_rep Location: 455802 -455895 bp Feature: domain Description: WG_beta_rep Location: 455919-455988 bp Feature: domain Description: WG_beta_rep Location: 455919-455988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT REC (smart00448), RVT-Retrons, retropepsin_like (cd00303), WG_beta_rep (pfam14903)