myRT

myRT report for GCA_902800115.1_Rumen_uncultured_genome_RUG14535

Download annotations/find similar RTs

Seq: CADCCV010000003.1 uncultured Bacteroidales bacterium isolate RUG14535 genome assembly, contig: RUG14535_asm_3, whole genome shotgun sequence (152963 bp)
Overview 1 RT 1: 120884-125360 bp Neighborhood of RT #1 [120884, 125404] PRK07570 RVT-Retrons PDDEXK_9 AAA-ATPase_like Feature: gene Location: 120884-121639 bp Feature: domain Description: PRK07570 Location: 120899-121634 bp Feature: domain Description: PRK07570 Location: 1 20899-1 21 634 bp Feature: gene Location: 121960-122226 bp Feature: gene Location: 122111-123499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122294-122891 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 22294-1 22891 bp Feature: gene Location: 123867-124484 bp Feature: domain Description: PDDEXK_9 Location: 124200-124470 bp Feature: domain Description: PDDEXK_9 Location: 1 24200-1 24470 bp Feature: gene Location: 124508-125404 bp Feature: domain Description: AAA-ATPase_like Location: 124535-125360 bp Feature: domain Description: AAA-ATPase_like Location: 1 24535-1 25360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07570 (succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated), RVT-Retrons, PDDEXK_9 (pfam08011), AAA-ATPase_like (pfam09820)

Seq: CADCCV010000004.1 uncultured Bacteroidales bacterium isolate RUG14535 genome assembly, contig: RUG14535_asm_4, whole genome shotgun sequence (91268 bp)
Overview 1 RT 1: 87658-91265 bp Neighborhood of RT #1 [87658, 91267] RVT-DGRs SufE Feature: gene Location: 87658-88833 bp Feature: gene Location: 88891-89268 bp Feature: gene Location: 89255-90667 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89657-90338 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89657-90338 bp Feature: gene Location: 90863-91012 bp Feature: gene Location: 91040-91267 bp Feature: domain Description: SufE Location: 91049-91265 bp Feature: domain Description: SufE Location: 91049-912 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, SufE (pfam02657)

Seq: CADCCV010000011.1 uncultured Bacteroidales bacterium isolate RUG14535 genome assembly, contig: RUG14535_asm_11, whole genome shotgun sequence (68427 bp)
Overview 1 RT 1: 32891-38330 bp Neighborhood of RT #1 [32891, 38389] RVT-DGRs MethyltransfD12 TS_Pyrimidine_HMase Feature: gene Location: 32891-34843 bp Feature: gene Location: 35029-35247 bp Feature: gene Location: 35302-36597 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35512-36094 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 5512-3 6094 bp Feature: gene Location: 36894-37751 bp Feature: domain Description: MethyltransfD12 Location: 36930-37113 bp Feature: domain Description: MethyltransfD12 Location: 3 693 0-3 7113 bp Feature: gene Location: 37748-38389 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 37763-38330 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 3 7763 -3 83 3 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, MethyltransfD12 (pfam02086), TS_Pyrimidine_HMase (cl19097)