myRT

myRT report for GCA_902800325.1_Rumen_uncultured_genome_RUG14549

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Seq: CADCDW010000012.1 uncultured Lachnospiraceae bacterium isolate RUG14549 genome assembly, contig: RUG14549_asm_12, whole genome shotgun sequence (54299 bp)
Overview 1 RT 1: 10054-15622 bp Neighborhood of RT #1 [10054, 15663] CbiK LolD RVT-GII GIIM PRK03147 GGDEF Feature: gene Location: 10054-11088 bp Feature: domain Description: CbiK Location: 10315-11074 bp Feature: domain Description: CbiK Location: 1 031 5-1 1 074 bp Feature: gene Location: 11607-11888 bp Feature: domain Description: LolD Location: 11610-11826 bp Feature: domain Description: LolD Location: 1 1 61 0-1 1 826 bp Feature: gene Location: 12055-13338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12259-12874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2259-1 2874 bp Feature: domain Description: GIIM Note: maturase Location: 12934-13165 bp Feature: domain Description: GIIM Note: maturase Location: 1 2934-1 31 65 bp Feature: gene Location: 13854-14090 bp Feature: domain Description: PRK03147 Location: 13890-14076 bp Feature: domain Description: PRK031 47 Location: 1 3890-1 4076 bp Feature: gene Location: 14122-15663 bp Feature: domain Description: GGDEF Location: 15187-15622 bp Feature: domain Description: GGDEF Location: 1 51 87-1 5622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbiK (pfam06180), LolD (COG1136), RVT-GII, GIIM (pfam08388), PRK03147 (thiol-disulfide oxidoreductase ResA), GGDEF (TIGR00254)

Seq: CADCDW010000052.1 uncultured Lachnospiraceae bacterium isolate RUG14549 genome assembly, contig: RUG14549_asm_52, whole genome shotgun sequence (18698 bp)
Overview 1 RT 1: 456-4976 bp Neighborhood of RT #1 [456, 4976] RVT-UG26 RVT-UG26 PRK04173 Feature: gene Location: 456-608 bp Feature: gene Location: 650-1216 bp Feature: gene Location: 1209-2567 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1362-1692 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 1362 -1692 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1887-2166 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 1887-2 166 bp Feature: gene Location: 2964-4361 bp Feature: domain Description: PRK04173 Location: 2973-4350 bp Feature: domain Description: PRK04173 Location: 2 973-4350 bp Feature: gene Location: 4383-4976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, PRK04173 (glycyl-tRNA synthetase; Provisional)