myRT

myRT report for GCA_902800965.1_Rumen_uncultured_genome_RUG14627

Download annotations/find similar RTs

Seq: CADCGK010000003.1 uncultured Bacteroidia bacterium isolate RUG14627 genome assembly, contig: RUG14627_asm_3, whole genome shotgun sequence (170087 bp)
Overview 1 RT 1: 127690-132245 bp Neighborhood of RT #1 [127690, 137014] HDc RVT-Retrons RpsA Feature: gene Location: 127690-128331 bp Feature: domain Description: HDc Location: 127870-128293 bp Feature: domain Description: HDc Location: 1 27870-1 28293 bp Feature: gene Location: 128373-128879 bp Feature: gene Location: 129130-130284 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 129313-129871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2931 3-1 29871 bp Feature: gene Location: 130297-131280 bp Feature: gene Location: 131423-137014 bp Feature: domain Description: RpsA Location: 131690-132245 bp Feature: domain Description: RpsA Location: 1 31 690-1 32245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HDc (smart00471), RVT-Retrons, RpsA (COG0539)

Seq: CADCGK010000008.1 uncultured Bacteroidia bacterium isolate RUG14627 genome assembly, contig: RUG14627_asm_8, whole genome shotgun sequence (114821 bp)
Overview 1 RT 1: 5605-11270 bp Neighborhood of RT #1 [5605, 11272] MPP_GpdQ RVT-UG26 PRK00331 Feature: gene Location: 5605-6294 bp Feature: gene Location: 6300-7211 bp Feature: domain Description: MPP_GpdQ Location: 6498-7119 bp Feature: domain Description: MPP_GpdQ Location: 6498-7119 bp Feature: gene Location: 7485-8684 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 7686-8301 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 7686-8301 bp Feature: gene Location: 8848-9399 bp Feature: gene Location: 9428-11272 bp Feature: domain Description: PRK00331 Location: 9431-11270 bp Feature: domain Description: PRK00331 Location: 9431-112 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_GpdQ (cd07402), RVT-UG26, PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase)