myRT

myRT report for GCA_902801025.1_Rumen_uncultured_genome_RUG14632

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Seq: CADCGZ010000031.1 uncultured bacterium isolate RUG14632 genome assembly, contig: RUG14632_asm_31, whole genome shotgun sequence (63248 bp)
Overview 1 RT 1: 36412-41168 bp Neighborhood of RT #1 [36412, 41239] DraG LysM LysM RVT-UG28b RVT-UG28b DUF1848 Feature: gene Location: 36412-37239 bp Feature: domain Description: DraG Location: 36421-37207 bp Feature: domain Description: DraG Location: 36421 -37207 bp Feature: gene Location: 37322-38212 bp Feature: domain Description: LysM Location: 37418-37547 bp Feature: domain Description: LysM Location: 3741 8-37547 bp Feature: domain Description: LysM Location: 37601-37733 bp Feature: domain Description: LysM Location: 37601 -37733 bp Feature: gene Location: 38269-39867 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 38698-39055 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 38698-39055 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 39073-39277 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 39073-39277 bp Feature: gene Location: 40061-40216 bp Feature: gene Location: 40283-41239 bp Feature: domain Description: DUF1848 Location: 40319-41168 bp Feature: domain Description: DUF1 848 Location: 4031 9-41 1 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DraG (COG1397), LysM (smart00257), RVT-UG28b, DUF1848 (pfam08902)

Seq: CADCGZ010000060.1 uncultured bacterium isolate RUG14632 genome assembly, contig: RUG14632_asm_60, whole genome shotgun sequence (13171 bp)
Overview 1 RT 1: 2-13062 bp Neighborhood of RT #1 [2, 13062] PAF_acetylesterase_like RVT-GII GIIM DUF1565 DUF1565 DUF1565 Feature: gene Location: 2-1885 bp Feature: gene Location: 1923-4214 bp Feature: domain Description: PAF_acetylesterase_like Location: 3393-4020 bp Feature: domain Description: PAF_acetylesterase_like Location: 3393-402 0 bp Feature: gene Location: 4340-5995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4970-5618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4970-5618 bp Feature: domain Description: GIIM Note: maturase Location: 5693-5915 bp Feature: domain Description: GIIM Note: maturase Location: 5693-5915 bp Feature: gene Location: 6061-10104 bp Feature: domain Description: DUF1565 Location: 6256-6370 bp Feature: domain Description: DUF1565 Location: 62 56-6370 bp Feature: domain Description: DUF1565 Location: 7624-7978 bp Feature: domain Description: DUF1565 Location: 762 4-7978 bp Feature: domain Description: DUF1565 Location: 8698-9280 bp Feature: domain Description: DUF1565 Location: 8698-92 80 bp Feature: gene Location: 10114-13062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAF_acetylesterase_like (cd01820), RVT-GII, GIIM (pfam08388), DUF1565 (pfam07602)