myRT

myRT report for GCA_902801625.1_Rumen_uncultured_genome_RUG14699

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Seq: CADCJI010000002.1 uncultured Bacteroidia bacterium isolate RUG14699 genome assembly, contig: RUG14699_asm_2, whole genome shotgun sequence (134872 bp)
Overview 1 RT 1: 11134-24802 bp Neighborhood of RT #1 [11134, 24802] Phage_head_fibr Phage_head_fibr Phage_head_fibr RVT-DGRs CE2_N LamGL Feature: gene Location: 11134-15249 bp Feature: domain Description: Phage_head_fibr Location: 12322-12403 bp Feature: domain Description: Phage_head_fibr Location: 1 2322-1 2403 bp Feature: domain Description: Phage_head_fibr Location: 12502-12754 bp Feature: domain Description: Phage_head_fibr Location: 1 2502-1 2754 bp Feature: domain Description: Phage_head_fibr Location: 13057-13138 bp Feature: domain Description: Phage_head_fibr Location: 1 3057-1 31 38 bp Feature: gene Location: 15314-15823 bp Feature: gene Location: 15823-17166 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16036-16663 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 6036-1 6663 bp Feature: gene Location: 17624-24016 bp Feature: domain Description: CE2_N Location: 18824-18986 bp Feature: domain Description: CE2_N Location: 1 8824-1 8986 bp Feature: domain Description: LamGL Location: 19385-19682 bp Feature: domain Description: LamGL Location: 1 9385-1 9682 bp Feature: gene Location: 24218-24802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_head_fibr (pfam11133), RVT-DGRs, CE2_N (pfam17996), LamGL (smart00560)

Seq: CADCJI010000023.1 uncultured Bacteroidia bacterium isolate RUG14699 genome assembly, contig: RUG14699_asm_23, whole genome shotgun sequence (65870 bp)
Overview 1 RT 1: 30923-36679 bp Neighborhood of RT #1 [30923, 36711] RVT-Retrons YbjD YbjD DEXQc_UvrD DEXQc_UvrD RecB Feature: gene Location: 30923-31075 bp Feature: gene Location: 31608-32915 bp Feature: gene Location: 33051-34100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33279-33846 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 332 79-33846 bp Feature: gene Location: 34133-35701 bp Feature: domain Description: YbjD Location: 34136-34268 bp Feature: domain Description: YbjD Location: 34136-342 68 bp Feature: domain Description: YbjD Location: 34928-35474 bp Feature: domain Description: YbjD Location: 3492 8-35474 bp Feature: gene Location: 35686-36711 bp Feature: domain Description: DEXQc_UvrD Location: 35692-35830 bp Feature: domain Description: DEXQc_UvrD Location: 35692 -35830 bp Feature: domain Description: DEXQc_UvrD Location: 35995-36208 bp Feature: domain Description: DEXQc_UvrD Location: 35995-362 08 bp Feature: domain Description: RecB Location: 36628-36679 bp Feature: domain Description: RecB Location: 3662 8-36679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, YbjD (COG3593), DEXQc_UvrD (cd17932), RecB (COG4998)