myRT

myRT report for GCA_902801675.1_Rumen_uncultured_genome_RUG14689

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Seq: CADCJG010000001.1 uncultured Lachnospiraceae bacterium isolate RUG14689 genome assembly, contig: RUG14689_asm_1, whole genome shotgun sequence (94529 bp)
Overview 1 RT 1: 1822-5754 bp Neighborhood of RT #1 [1822, 5756] RVT-GII GIIM STKc_PknB_like WG_beta_rep LRR_3 Feature: gene Location: 1822-2160 bp Feature: gene Location: 2176-2415 bp Feature: gene Location: 2822-4216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140-3764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 40-3764 bp Feature: domain Description: GIIM Note: maturase Location: 3821-4043 bp Feature: domain Description: GIIM Note: maturase Location: 3821 -4043 bp Feature: gene Location: 4575-5474 bp Feature: domain Description: STKc_PknB_like Location: 4602-5307 bp Feature: domain Description: STKc_PknB_like Location: 4602-5307 bp Feature: domain Description: WG_beta_rep Location: 5334-5427 bp Feature: domain Description: WG_beta_rep Location: 5334-5427 bp Feature: gene Location: 5535-5756 bp Feature: domain Description: LRR_3 Location: 5580-5754 bp Feature: domain Description: LRR_3 Location: 5580-5754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), STKc_PknB_like (cd14014), WG_beta_rep (pfam14903), LRR_3 (sd00036)

Seq: CADCJG010000007.1 uncultured Lachnospiraceae bacterium isolate RUG14689 genome assembly, contig: RUG14689_asm_7, whole genome shotgun sequence (45139 bp)
Overview 1 RT 1: 20445-25271 bp Neighborhood of RT #1 [20445, 25294] Avd_like Avd_like RVT-DGRs DUF4376 Feature: gene Location: 20445-21350 bp Feature: gene Location: 21413-22027 bp Feature: domain Description: Avd_like Location: 21416-21683 bp Feature: domain Description: Avd_like Location: 2 1416-2 1683 bp Feature: domain Description: Avd_like Location: 21743-21998 bp Feature: domain Description: Avd_like Location: 2 1743-2 1998 bp Feature: gene Location: 22211-23470 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22514-23132 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 2 514-2 3132 bp Feature: gene Location: 23391-24884 bp Feature: gene Location: 24884-25294 bp Feature: domain Description: DUF4376 Location: 24995-25271 bp Feature: domain Description: DUF4376 Location: 2 4995-2 52 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, DUF4376 (pfam14301)

Seq: CADCJG010000024.1 uncultured Lachnospiraceae bacterium isolate RUG14689 genome assembly, contig: RUG14689_asm_24, whole genome shotgun sequence (26213 bp)
Overview 1 RT 1: 12575-14802 bp Neighborhood of RT #1 [12575, 14802] RVT-UG26 Feature: gene Location: 12575-12814 bp Feature: gene Location: 12777-13040 bp Feature: gene Location: 13196-14392 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 13400-14006 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 13 400-14006 bp Feature: gene Location: 14394-14645 bp Feature: gene Location: 14623-14802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26

Seq: CADCJG010000087.1 uncultured Lachnospiraceae bacterium isolate RUG14689 genome assembly, contig: RUG14689_asm_87, whole genome shotgun sequence (11144 bp)
Overview 1 RT 1: 8374-11028 bp Neighborhood of RT #1 [8374, 11028] RVT-GII GIIM Feature: gene Location: 8374-8643 bp Feature: gene Location: 8643-9020 bp Feature: gene Location: 9330-10628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9585-10275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9585-10275 bp Feature: domain Description: GIIM Note: maturase Location: 10335-10560 bp Feature: domain Description: GIIM Note: maturase Location: 10335-10560 bp Feature: gene Location: 10576-11028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CADCJG010000151.1 uncultured Lachnospiraceae bacterium isolate RUG14689 genome assembly, contig: RUG14689_asm_151, whole genome shotgun sequence (3460 bp)
Overview 1 RT 1: 3-3457 bp Neighborhood of RT #1 [3, 3457] Helicase_C RVT-GII Intron_maturas2 Feature: gene Location: 3-839 bp Feature: domain Description: Helicase_C Location: 255-612 bp Feature: domain Description: Helicase_C Location: 25 5 -612 bp Feature: gene Location: 1388-3280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1709-2549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1709-25 49 bp Feature: domain Description: Intron_maturas2 Location: 2627-2945 bp Feature: domain Description: Intron_maturas2 Location: 2627-2945 bp Feature: gene Location: 3290-3457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Helicase_C (pfam00271), RVT-GII, Intron_maturas2 (pfam01348)