myRT

myRT report for GCA_902802175.1_Rumen_uncultured_genome_RUG14741

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Seq: CADCLF010000029.1 uncultured Lachnospiraceae bacterium isolate RUG14741 genome assembly, contig: RUG14741_asm_29, whole genome shotgun sequence (20344 bp)
Overview 1 RT 1: 4503-7031 bp Neighborhood of RT #1 [4503, 7031] Phage_XkdX RVT-DGRs Feature: gene Location: 4503-4643 bp Feature: domain Description: Phage_XkdX Location: 4521-4635 bp Feature: domain Description: Phage_XkdX Location: 4521 -4635 bp Feature: gene Location: 4654-4962 bp Feature: gene Location: 4950-6107 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5133-5859 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51 33-5859 bp Feature: gene Location: 6415-6597 bp Feature: gene Location: 6600-7031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: CADCLF010000073.1 uncultured Lachnospiraceae bacterium isolate RUG14741 genome assembly, contig: RUG14741_asm_73, whole genome shotgun sequence (11869 bp)
Overview 1 RT 1: 7760-11641 bp Neighborhood of RT #1 [7760, 11641] SLC5sbd PRK11886 RVT-GII GIIM Feature: gene Location: 7760-9064 bp Feature: domain Description: SLC5sbd Location: 7775-8993 bp Feature: domain Description: SLC5sbd Location: 7775-8993 bp Feature: gene Location: 9134-9901 bp Feature: domain Description: PRK11886 Location: 9146-9800 bp Feature: domain Description: PRK11886 Location: 9146-9800 bp Feature: gene Location: 10080-11363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10284-10899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 84-10899 bp Feature: domain Description: GIIM Note: maturase Location: 10962-11190 bp Feature: domain Description: GIIM Note: maturase Location: 10962 -11190 bp Feature: gene Location: 11462-11641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SLC5sbd (cd10322), PRK11886 (bifunctional biotin-- ligase/biotin operon repressor BirA)