myRT

myRT report for GCA_902802465.1_Rumen_uncultured_genome_RUG14773

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Seq: CADCMC010000004.1 uncultured Prevotellaceae bacterium isolate RUG14773 genome assembly, contig: RUG14773_asm_4, whole genome shotgun sequence (242083 bp)
Overview 1 RT 1: 238423-242008 bp Neighborhood of RT #1 [238423, 242082] HTH_34 RVT-Retrons trans_reg_C Feature: gene Location: 238423-239115 bp Feature: gene Location: 239119-239415 bp Feature: domain Description: HTH_34 Location: 239161-239398 bp Feature: domain Description: HTH_34 Location: 2391 61 -239398 bp Feature: gene Location: 239954-240823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 240140-240650 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2401 40-240650 bp Feature: gene Location: 240842-241090 bp Feature: gene Location: 241681-242082 bp Feature: domain Description: trans_reg_C Location: 241777-242008 bp Feature: domain Description: trans_reg_C Location: 241 777-242008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_34 (pfam13601), RVT-Retrons, trans_reg_C (cd00383)

Seq: CADCMC010000008.1 uncultured Prevotellaceae bacterium isolate RUG14773 genome assembly, contig: RUG14773_asm_8, whole genome shotgun sequence (102351 bp)
Overview 1 RT 1: 99425-102339 bp Neighborhood of RT #1 [99425, 102350] prfC RVT-GII Feature: gene Location: 99425-100993 bp Feature: domain Description: prfC Location: 99431-100988 bp Feature: domain Description: prfC Location: 99431-100988 bp Feature: gene Location: 101122-101265 bp Feature: gene Location: 101457-102350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101721-102339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10172 1-102 339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, prfC (TIGR00503)

Seq: CADCMC010000023.1 uncultured Prevotellaceae bacterium isolate RUG14773 genome assembly, contig: RUG14773_asm_23, whole genome shotgun sequence (53870 bp)
Overview 1 RT 1: 51806-53858 bp Neighborhood of RT #1 [51806, 53869] His_Phos_1 GIIM RVT-GII Feature: gene Location: 51806-52312 bp Feature: domain Description: His_Phos_1 Location: 51818-52304 bp Feature: domain Description: His_Phos_1 Location: 51818-523 04 bp Feature: gene Location: 52544-52960 bp Feature: domain Description: GIIM Note: maturase Location: 52574-52802 bp Feature: domain Description: GIIM Note: maturase Location: 52574-52802 bp Feature: gene Location: 52976-53869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53240-53858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 240-53 858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT His_Phos_1 (pfam00300), GIIM (pfam08388), RVT-GII