myRT

myRT report for GCA_902802685.1_Rumen_uncultured_genome_RUG14793

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Seq: CADCMW010000011.1 uncultured Prevotellaceae bacterium isolate RUG14793 genome assembly, contig: RUG14793_asm_11, whole genome shotgun sequence (55275 bp)
Overview 1 RT 1: 45256-51103 bp Neighborhood of RT #1 [45256, 51135] YejR RVT-GII GIIM OafA PqqL Feature: gene Location: 45256-46584 bp Feature: domain Description: YejR Location: 45274-46573 bp Feature: domain Description: YejR Location: 45274-46573 bp Feature: gene Location: 46594-46767 bp Feature: gene Location: 47066-48478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47408-48023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47408-48023 bp Feature: domain Description: GIIM Note: maturase Location: 48083-48290 bp Feature: domain Description: GIIM Note: maturase Location: 48083-48290 bp Feature: gene Location: 48620-49615 bp Feature: domain Description: OafA Location: 48683-49550 bp Feature: domain Description: OafA Location: 48683-49550 bp Feature: gene Location: 49897-51135 bp Feature: domain Description: PqqL Location: 49906-51103 bp Feature: domain Description: PqqL Location: 49906-51 1 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YejR (COG0523), RVT-GII, GIIM (pfam08388), OafA (COG1835), PqqL (COG0612)

Seq: CADCMW010000026.1 uncultured Prevotellaceae bacterium isolate RUG14793 genome assembly, contig: RUG14793_asm_26, whole genome shotgun sequence (57585 bp)
Overview 1 RT 1: 15111-19709 bp Neighborhood of RT #1 [15111, 19759] SusD RVT-UNC DUF1016_N YhcG_C Feature: gene Location: 15111-16757 bp Feature: domain Description: SusD Location: 15249-16551 bp Feature: domain Description: SusD Location: 152 49-16551 bp Feature: gene Location: 16768-17583 bp Feature: gene Location: 17607-17873 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 17784-17862 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 17784-17862 bp Feature: gene Location: 18114-18386 bp Feature: gene Location: 18716-19759 bp Feature: domain Description: DUF1016_N Location: 18773-19175 bp Feature: domain Description: DUF1016_N Location: 18773-19175 bp Feature: domain Description: YhcG_C Location: 19250-19709 bp Feature: domain Description: YhcG_C Location: 192 50-19709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SusD (NF033071), RVT-CRISPR/RVT-UG7/RVT-GII(RVT-UNC), DUF1016_N (pfam17761), YhcG_C

Seq: CADCMW010000107.1 uncultured Prevotellaceae bacterium isolate RUG14793 genome assembly, contig: RUG14793_asm_107, whole genome shotgun sequence (6914 bp)
Overview 1 RT 1: 884-6779 bp Neighborhood of RT #1 [884, 6787] SusD SusD 2-Hacid_dh_4 RVT-Retrons kpsF PRK05198 Feature: gene Location: 884-2224 bp Feature: domain Description: SusD Location: 1205-1310 bp Feature: domain Description: SusD Location: 1205-13 10 bp Feature: domain Description: SusD Location: 1352-2159 bp Feature: domain Description: SusD Location: 13 52-2159 bp Feature: gene Location: 2348-3310 bp Feature: domain Description: 2-Hacid_dh_4 Location: 2357-3278 bp Feature: domain Description: 2-Hacid_dh_4 Location: 23 57-3 278 bp Feature: gene Location: 3580-5013 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3847-4429 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 847-4429 bp Feature: gene Location: 5068-6018 bp Feature: domain Description: kpsF Location: 5194-5995 bp Feature: domain Description: kpsF Location: 5194-5995 bp Feature: gene Location: 6026-6787 bp Feature: domain Description: PRK05198 Location: 6035-6779 bp Feature: domain Description: PRK05198 Location: 603 5-6779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SusD (NF033071), 2-Hacid_dh_4 (cd12162), RVT-Retrons, kpsF (TIGR00393), PRK05198 (2-dehydro-3-deoxyphosphooctonate aldolase; Provisional)