myRT

myRT report for GCA_902803175.1_Rumen_uncultured_genome_RUG14843

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Seq: CADCPB010000052.1 uncultured Butyrivibrio sp. isolate RUG14843 genome assembly, contig: RUG14843_asm_52, whole genome shotgun sequence (7525 bp)
Overview 1 RT 1: 5039-7523 bp Neighborhood of RT #1 [5039, 7523] NTP-PPase_RS21-C6_like RVT-GII GIIM Feature: gene Location: 5039-5359 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 5060-5300 bp Feature: domain Description: NTP-PPase_RS21 -C6_like Location: 5060-5300 bp Feature: gene Location: 5340-5513 bp Feature: gene Location: 5702-6943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5906-6563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5906-6563 bp Feature: domain Description: GIIM Note: maturase Location: 6644-6863 bp Feature: domain Description: GIIM Note: maturase Location: 6644-6863 bp Feature: gene Location: 7338-7523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_RS21-C6_like (cd11537), RVT-GII, GIIM (pfam08388)

Seq: CADCPB010000384.1 uncultured Butyrivibrio sp. isolate RUG14843 genome assembly, contig: RUG14843_asm_384, whole genome shotgun sequence (3773 bp)
Overview 1 RT 1: 2-3268 bp Neighborhood of RT #1 [2, 3327] RVT-Retrons recQ SkfB Feature: gene Location: 2-235 bp Feature: gene Location: 283-1332 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 475-1072 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 475-1072 bp Feature: gene Location: 1380-2309 bp Feature: domain Description: recQ Location: 1389-1752 bp Feature: domain Description: recQ Location: 1389-1752 bp Feature: gene Location: 2302-3327 bp Feature: domain Description: SkfB Location: 2323-3268 bp Feature: domain Description: SkfB Location: 2 32 3-32 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recQ (TIGR01389), SkfB (COG0535), RVT-Retrons

Seq: CADCPB010000485.1 uncultured Butyrivibrio sp. isolate RUG14843 genome assembly, contig: RUG14843_asm_485, whole genome shotgun sequence (2160 bp)
Overview 1 RT 1: 2-1660 bp Neighborhood of RT #1 [2, 2157] WYL RVT-Retrons Feature: gene Location: 2-553 bp Feature: domain Description: WYL Location: 32-503 bp Feature: domain Description: WYL Location: 3 2-503 bp Feature: gene Location: 754-2157 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1027-1660 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1027-1660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-Retrons