myRT

myRT report for GCA_902803345.1_Rumen_uncultured_genome_RUG14862

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Seq: CADCPV010000082.1 uncultured Clostridiales bacterium isolate RUG14862 genome assembly, contig: RUG14862_asm_82, whole genome shotgun sequence (10243 bp)
Overview 1 RT 1: 2230-9339 bp Neighborhood of RT #1 [2230, 9449] HTH_XRE RVT-UG26 YAcAr DUF4231 BglX PRK15098 Feature: gene Location: 2230-2532 bp Feature: domain Description: HTH_XRE Location: 2248-2413 bp Feature: domain Description: HTH_XRE Location: 2248-241 3 bp Feature: gene Location: 2814-3365 bp Feature: gene Location: 3606-4799 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3801-4422 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3801 -4422 bp Feature: gene Location: 4821-6530 bp Feature: domain Description: YAcAr Location: 4932-5118 bp Feature: domain Description: YAcAr Location: 4932-51 1 8 bp Feature: domain Description: DUF4231 Location: 5679-5934 bp Feature: domain Description: DUF4231 Location: 5679-5934 bp Feature: gene Location: 6543-9449 bp Feature: domain Description: BglX Location: 6672-7716 bp Feature: domain Description: BglX Location: 6672-771 6 bp Feature: domain Description: PRK15098 Location: 8520-9339 bp Feature: domain Description: PRK1 5098 Location: 8520-9339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG26, YAcAr, DUF4231 (pfam14015), BglX (COG1472), PRK15098 (beta-glucosidase BglX)

Seq: CADCPV010000302.1 uncultured Clostridiales bacterium isolate RUG14862 genome assembly, contig: RUG14862_asm_302, whole genome shotgun sequence (5768 bp)
Overview 1 RT 1: 2141-5767 bp Neighborhood of RT #1 [2141, 5766] ZupT RVT-Retrons Nnr1 type_IV_pilB Feature: gene Location: 2141-2623 bp Feature: domain Description: ZupT Location: 2177-2543 bp Feature: domain Description: ZupT Location: 2 177-2 543 bp Feature: gene Location: 2738-2869 bp Feature: gene Location: 2909-4669 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3029-3584 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 302 9-3584 bp Feature: domain Description: Nnr1 Location: 4019-4625 bp Feature: domain Description: Nnr1 Location: 4019-462 5 bp Feature: gene Location: 4888-5766 bp Feature: domain Description: type_IV_pilB Location: 4945-5767 bp Feature: domain Description: type_IV_pilB Location: 4945-5767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZupT (COG0428), RVT-Retrons, Nnr1 (COG0062), type_IV_pilB (TIGR02538)